LOCUS       NM_001109052            4977 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus exosomal polycystin 1 interacting protein
            (Epcip), mRNA.
ACCESSION   NM_001109052 XM_001073387 XM_039088570 XM_573257
VERSION     NM_001109052.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On or before Jul 22, 2021 this sequence version replaced
            XM_039088570.1, NM_001109052.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22399489.4111137.1,
                                           SRR26360194.1341307.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351, SAMN06680423
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-120               JAXUCZ010000011.1  43811269-43811388   c
            121-4977            JAXUCZ010000011.1  43793924-43798780   c
FEATURES             Location/Qualifiers
     source          1..4977
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q11"
     gene            1..4977
                     /gene="Epcip"
                     /gene_synonym="C11h21orf62; RGD1562726"
                     /note="exosomal polycystin 1 interacting protein"
                     /db_xref="GeneID:498060"
                     /db_xref="RGD:1562726"
     exon            1..120
                     /gene="Epcip"
                     /gene_synonym="C11h21orf62; RGD1562726"
                     /inference="alignment:Splign:2.1.0"
     exon            121..4977
                     /gene="Epcip"
                     /gene_synonym="C11h21orf62; RGD1562726"
                     /inference="alignment:Splign:2.1.0"
     CDS             185..820
                     /gene="Epcip"
                     /gene_synonym="C11h21orf62; RGD1562726"
                     /note="uncharacterized protein C21orf62 homolog;
                     polycystin-1-interacting protein 1"
                     /codon_start=1
                     /product="polycystin-1-interacting protein 1 precursor"
                     /protein_id="NP_001102522.1"
                     /db_xref="GeneID:498060"
                     /db_xref="RGD:1562726"
                     /translation="MTAPSSFCLLLGALGIFALGRFAEGQSRTLIFTKGNTIRNCSCP
                     ADIRDCDYSLANLMCSCKSVLPLAMEQTSYHGHLTIWFTDISTLGHLLKFTLVQDLKL
                     SLCGSNTFPTKYLAVCGLKRLHINTEAKHPSGEQSILIHNGREGSSLYKGWQTRVFIS
                     LLDVALFNRDSSLKSYSIDDISSLTGDFPDFSYFITFPVPNNRSYLVTVIY"
ORIGIN      
        1 gcattccacc cggcttgcag attaaagcag ctgtcaggcc agggggaagg cacggtggcc
       61 agggaagagc cccgaggtct acagattggg cagacaggcc ctgccgtggg gccgcaagat
      121 gtgacttgca acggactggc tcaggaagga gaaataggag cacactagtc cacaccgggc
      181 cacaatgaca gcgccttcca gcttctgcct tctgctagga gcgctaggta tctttgccct
      241 tggccgcttc gcggagggtc agagcaggac actgattttc acaaagggaa acaccattcg
      301 taactgcagc tgccccgcag acatccggga ctgtgactac agtttggcca acctgatgtg
      361 cagctgtaag tctgtcctgc ctctggccat ggagcaaacc agctatcatg gccacctcac
      421 catctggttc acagatatat ccacgttggg ccacctgctg aagttcactc tggtccaaga
      481 cttgaagctt tccctgtgtg gttccaacac cttccccacc aagtacctgg ctgtctgtgg
      541 cctgaagagg cttcacatca atactgaggc caagcatccc tccggggagc agagcatact
      601 catccacaac gggagggaag gcagttcctt gtacaagggc tggcaaacgc gtgtgttcat
      661 ctcactctta gacgtggctc ttttcaacag agactcttct ctaaagtcat atagtattga
      721 tgacatttct agcctcaccg gtgactttcc tgacttttct tactttataa ctttcccagt
      781 gccaaacaac cgaagctacc ttgtcaccgt tatttattag catcctgtgt ccatccacca
      841 ggacctctga gaaaataaat ggagcctctg agcaaggcgt ctgggaatgc ggtcatgaga
      901 tagctgtctc tgttccctct ctgagcctcc atctacagca aacacacacc agagagcagc
      961 cggttccact ttcactgttc cactttcaat ctaagagcaa cctgacccct gaactatgtc
     1021 ccaagggcca gctagaagct tggtctttgc agctggtagc ctgtggagag ctgtcaggtt
     1081 agaaggggat cggggagtgc ataccagaga ctgtttagtg gagctcggta tactcatggc
     1141 cccaaggaag agatttttct ttcagaatgc agtaattctt ccttatgtgt gtgtgtacat
     1201 tccaagactc tgaggacacc tgaatgagca aacaatacta gaccctatgc atactgtgtt
     1261 ttccctatag agacttttga tacagtctaa cttataagtt aagatcactg tgggattaaa
     1321 acctgtaaca cactgtaaga aagttgtgcc aatatgtgct tgctcttccc gtggcgatgg
     1381 cgctctttgg catagccaca tttccagcgt tgctactttt tacatgatgg ctatcatgga
     1441 ataaaatata tgtttattgg atcataacat ggtcagtctg acaacagaga ccagtcacta
     1501 aggggctcat gggtggtagt gtatttagtg tttatgaaca ggcatgggac aggcatgtcc
     1561 catgggacag gttcgtgtcc caggtagaat caggcaggac cacattcttc acactcccta
     1621 gaacaacttg aagtttaaaa cttctgattt ataaatgaaa ctgcacattg gggaccatgg
     1681 taccccttct ctttttcttt tctttttcat tttgtgacat ggtctggaat tgtgattcaa
     1741 aaatgacaga tttcagaagt ctggggacct aaattcctct aaacgacagg tttgcccaga
     1801 ctgatagttt ccagatagtt gtgaagagca aatgcattga gaagttggaa tttaaaagtg
     1861 aatttatgga cttggcaagg ttatgtggga ctataacact acctgaaggc attggggttc
     1921 cgagagatgg gcacaggagt gaaaacacac gcccatacat ttagcctcaa atttatgcac
     1981 ggagtactgc tctgtgggga agttcttttc tggtctttct tcactttcac agagtagccg
     2041 gcaaggctct cctgggcctt cccttccctt tcctctgctc tattccagtg tcttcattcc
     2101 ctctgtcccc gactcctatg tcttgttatt gctccccacc cttctcccct cttgctcctg
     2161 attcaggact tagattgctg tcagcagact attaagccac acagggggca agccggggaa
     2221 tctaacaatc tcttcaaact tggtgttcaa atttcaaaga gttcatttta aaatgaaatt
     2281 ttggtcctta ttccttttgg aattttaaga tgagaaagtt aaagatactt catagcaggt
     2341 agttaacaca aaattgtact agacatgttg ataaaaggaa ccaaagcaag tatttaaaaa
     2401 acgatttatt aaattgttca ccattacata aaggaacgtt cccccataat aaagaccaaa
     2461 tttagcatta atgtgcaata cttttaaaac ccatgtgagg aggagggaga gacagctcaa
     2521 agctcaggag cacttgctgt tcctcaccca gcgcccgcgt ctgtttgctc acagccatct
     2581 ggagctccaa ctcagagctc ttttctggcc ttcatgcgaa cttgtacata tgtggcatgc
     2641 acaccataca tatgaataaa accccaaact aaaatgtaaa acccatgcca gctgtgacac
     2701 aaatgtctaa acttaaaata aaatgaagtt gaaacattta attcatgata ccatgatggt
     2761 gagaaataat atcataaaat cacgggttag ccacatcata tttttaatct taacattatt
     2821 gcatttgcat aactgacagg ggatttggtc attcagacta attaactcgg gtccacagtg
     2881 tcagcatcta aattaggaca aaacgaagtc caaactatga attttaatag aaaaggtaac
     2941 agcctcatta ctgatatagt tcagaggtta aagtgagaaa aagacaagga gttgggtgcc
     3001 aggggtaaga gaaagcaaga aagacttaag tcaaaagata aattatgtta ttaaccatca
     3061 ttactgcata catcacaaac tgaattttga tggaaaccta ttgttttaaa agagtgatgt
     3121 tagagattct atgtgcctgt aaataccttc catctggtag ctggtgctgg ctcgagagct
     3181 ttgcacacat ggcttatgtg attcttagga taaactgtag tgggccgtcc ggcttgggcc
     3241 agcagtttgt cacctgtggc cagctggtga aagtaggtat catttcaaag aggaggagga
     3301 agacatatat ctttctcaca cccacaaggg gttatataaa gatcgcgaag cacacggcat
     3361 atgaataata acaataaata ttgtccttta ttctaagttc tgtaaattct caaataatgt
     3421 gttgctatat tttcaccaag ttcttgcact aaaggttggg aggatgagaa gataaggctg
     3481 acagacagac agtttgatgc tctcatgtat gttagggatt cacgtaacat catgatgcaa
     3541 atatacatag aaatggccct cgttggccaa gcatataaat actttctaca gaatcgaaaa
     3601 gtattttcaa atgctacagg gatttcctta acttgggata ctattcgcaa tgtaaaggtt
     3661 atagacacga cacattttat aagttcatat gcacttctct atcatatcca acaaaataaa
     3721 aactaagacc agtatatgca gctccttgca gttttagtga cgctaatact gcgactatgg
     3781 tgagtttcaa gctatgaaga gaacagagct gagaaaagat acaatgtgct gatagtacag
     3841 ctcaacagga gagagcttac ccagcataca cgcgtgccgg aaataaattc ccagcacaac
     3901 acacacatac atagtgcaca cccttctgga tgccattgcc acgtacggct tcaagagctc
     3961 gagtaacagt gtcagagaat aagataaccg caagccatgg actctgctgc aagtgatacg
     4021 gtcctctccc aggacatcca gaactgatga aggagcaggc aagaagaggc agacagtaga
     4081 aagtgctggg ttcactggag gtagagcagg aggactgggc aggcagaggt gctgtggcta
     4141 ctggggagga cttggtaact cccaggaacc tgggtcaggt atgtggctgg agtggagagt
     4201 cgtgaggagt ggtttaggca atccagggtg tgaggaggtc cccctggaat actggtgggg
     4261 ctgagagtaa gtgaaagaat attcaggatg gttctagaag gaaacgcacc tccacctata
     4321 gctgtgatga ggagggtgtt gttccatcct ctcagctttt caaatgcggg caatgctttc
     4381 ggtccactta cagatgaaat gggcccaaag ctctgcccca ctctccctgg gctcatgtta
     4441 tgacactgct gcatagctct gctggcttct ggtaaaactc aaaatgtaca catgcaaaag
     4501 aagtactaat tctttgtgtt ttataccttt aggggatgtt tataacctca ttgtcttaaa
     4561 atatctgtgc tttaaaattc tcccaggggg tggttactgt gcagatggca gtacgagaac
     4621 acagaccata ggttggttcc tttaagaaag gatgcactga taattttgct tttgcactgg
     4681 ccattcatgc atttaaagtg tatgttgtga attaggttat atttgatata tttatgtcat
     4741 actgcatata atctatatga aaggggttct gaggcacatt cttgtacaaa gaggtgggag
     4801 aggtgagata ctcaactgga taaagtgcct gtagctgctt cttttctgtg acgggtccag
     4861 tagttcactc taggagctga cactctggag ctattgttaa ttgtcctgca ggacgatgtc
     4921 ctgtcttcat tctgaaaacc cctacacgtt ttatgacaat aaagatactt aatgtcc
//
