LOCUS       XM_039082293            1617 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to L-lactate dehydrogenase A
            chain (LDH-A) (LDH muscle subunit) (LDH-M) (RGD1562690), mRNA.
ACCESSION   XM_039082293
VERSION     XM_039082293.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082293.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1617
                     /gene="RGD1562690"
                     /note="similar to L-lactate dehydrogenase A chain (LDH-A)
                     (LDH muscle subunit) (LDH-M); Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 26
                     ESTs, 8 long SRA reads, 70 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:500965"
                     /db_xref="RGD:1562690"
     CDS             108..1106
                     /gene="RGD1562690"
                     /codon_start=1
                     /product="L-lactate dehydrogenase A chain-like"
                     /protein_id="XP_038938221.1"
                     /db_xref="GeneID:500965"
                     /db_xref="RGD:1562690"
                     /translation="MAALKEQLIVNLLKEEQVPQNKITVVGVGAVGMACAISILMKDL
                     ADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVIITSGARQQE
                     GESQLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILTYVAWKISGFPKNRVIG
                     SGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGVNVTGVSLKSLNPQL
                     GTDADKEQWKDVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPISTM
                     IKSLYGIKEDVFLSVPCILGQNGISDVVKVTLTPDEEARLKKSADTLWGIQKELQF"
ORIGIN      
        1 ttctcggtgc tggagccact gtcgcccatc tcgcgcacgc tactgctgct gctcgcccgt
       61 cgtcccccat cgtgcactaa gcggtcccaa aagattcaaa gtccaagatg gcagccctca
      121 aggaacagct gattgtgaat cttcttaagg aagaacaggt cccccagaac aagattacag
      181 ttgttggggt tggtgctgtt ggcatggctt gtgccatcag tatcttaatg aaggacttgg
      241 ctgatgagct tgcccttgtt gatgtcatag aagataagct aaagggagag atgatggatc
      301 ttcagcatgg cagccttttc cttaagacac caaaaattgt ctccagcaaa gattatagtg
      361 tgactgcaaa ctccaagctg gtcattatca cctcgggggc ccgtcagcaa gagggagaga
      421 gccagctcaa tttggtccag cgaaacgtga acatcttcaa gttcatcatt ccaaatgttg
      481 tgaaatacag tccacagtgc aaactgctca tcgtctcaaa cccagtggat atcttgacct
      541 acgtggcttg gaagatcagc ggcttcccca aaaacagagt tattggaagt ggttgcaatc
      601 tggattcggc tcggttccgt tacctgatgg gagaaaggct gggagttcat ccactgagct
      661 gtcacgggtg ggtcctggga gagcatggcg actccagtgt gcctgtgtgg agtggtgtga
      721 acgtcaccgg cgtctccctg aagtctctga acccacagct gggcacggat gcagacaagg
      781 agcagtggaa ggatgtgcac aagcaggtgg ttgacagtgc atacgaagtg atcaagctga
      841 aaggttacac atcctgggcc attggcctct ccgtggcaga cttggccgag agcataatga
      901 agaaccttag gcgggtgcat cccatttcca ccatgattaa gagtctctat ggaatcaagg
      961 aggatgtctt cctcagcgtc ccatgtatcc tgggacaaaa tggaatctca gatgttgtga
     1021 aggtgacact gactcctgac gaggaggccc gcctgaagaa gagtgcagat accctctggg
     1081 gaatccagaa ggagctgcag ttctaaagtc ttcccagtgt cctagccctt cactgtccag
     1141 gctgcagcag ggtttctatg gagacctgag ctgagctgtg gttagtccag ttggtccagt
     1201 tgtgttgagg tggtctgggg aaaatctcag ttccacagct ctaccctgct aagtggtact
     1261 tgtgtagtgg taacctggtt agtgtgacaa tcccactgtc tccaagacac actgccaact
     1321 gcatgcaggc tttgattagc ctgtgagcct gctgcattgc tgtgcttcgc accctcacca
     1381 aacatgccta ggccatgagt tcccagttag ttataagctg gctccagtgt gtaagtccat
     1441 cgtgcatatc ttgtgcatat cttgtgcata aatgttctac aggatatttt ctgtattata
     1501 tgtgtctgta gtgtacattg caatattatg tgaaatgtaa gatctgcata tggaggacgg
     1561 aaccaaccac tcaagtgtca tgccaaggaa aacaccaaat aaaccttgaa cagtgaa
//
