LOCUS       XM_039095005            6969 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to hypothetical protein
            4930474N05 (RGD1562641), mRNA.
ACCESSION   XM_039095005
VERSION     XM_039095005.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095005.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6969
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6969
                     /gene="RGD1562641"
                     /note="similar to hypothetical protein 4930474N05; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:290589"
                     /db_xref="RGD:1562641"
     CDS             2547..3224
                     /gene="RGD1562641"
                     /codon_start=1
                     /product="ral guanine nucleotide dissociation
                     stimulator-like"
                     /protein_id="XP_038950933.1"
                     /db_xref="GeneID:290589"
                     /db_xref="RGD:1562641"
                     /translation="MFSFHLRTTRGSGLKKDNREAHEGVWRHRVRSCLQRLWPFSQRG
                     KNLTKASQGQDLIEQGKNSSDTQDMRKPCRHSDISSGTVVKLVNNLVPSLQKGDPSFV
                     PAFLSTYRRCATTLQVLDLLFLRYSHFTADSEEDEQVKNTLCSFLETWMDKNPEDFCD
                     LSDLLPLKYLKAYLSVYMPHCDLSVRVKKLLTQLEEEHAKDSQVKDEDDSDLGTHISS
                     DPEILWV"
ORIGIN      
        1 gacagagaga gacagagatt tctagagata gagaccaaga cagagagaca gagagtggga
       61 gacagacaca cagagataca cacagagaga tgagagtaga ggaggcattc aagaacacaa
      121 aagtctaatg ttttttgcac ttctgatatt tgactctttc agaagtttcc tcccctcttt
      181 tatgattgct cagcttgaaa aatgacaaaa tgggtgattg gtgtatagca ttcacataaa
      241 caggtcttaa tcaagaattg agctttttca ggcacaagag cagcaggaag ttggggatgt
      301 tgagcagtta ctgatagaga aaagctttgc cagtcctttg tgttaaacta ccaagtttta
      361 tgcaggtcaa gccaatgaaa agaagccagc catcttagaa gttcacaatt ttgttaactc
      421 tatggctgct ccactggaat ctctgtccta tagtcaaagt ttttaactct gaatctcgtt
      481 ggtcggtggt aatatttaga cttcccctgc tcttctgtca caattatatg tataagtttt
      541 agtgcactgg tgcctctacc tgatccatgc ctgtgctgct ataaagaagc tatgggagtt
      601 ttatggcttc gtcttgggga catgatcagc ctcctagatt ctcgggacat gatcttcatg
      661 ttccatcatc cttctcctca taggctgttc atgtcttgat aatttccaac ttatcaaatg
      721 aaattggcct cttcaaagat gtatcctttg aacttagatg tccctgctcc cattaccaat
      781 agatacaact cacccacttg tagacataca gccaacaaaa cctacagaat tcatctatca
      841 tcttttactt tgtcttaaca gaagatgcag ctcaagacct ggatatggaa gtcggttcca
      901 ttgaaaggag ttttttccca ctattattag tgtaccaagt cattttaagg aattctggtt
      961 ggggatttag ctcagtggta gagcgcttgc ctaggaagcg caaggccctg ggttctgtcc
     1021 ccagctccga aaaaaagaac caaaaaaaaa aaaaaaagga attctggctt ttaccgtaac
     1081 cagtgaaagg atgttacagt ctactaacac acacacacac acacacacat actcccccac
     1141 cccacacaca cacacacaca aacacacaca caaatataca tggtcagaaa accatgaagg
     1201 catgcagtca tggatgtaag catgcatgca tgctcataca catgtaagtt ttgccatgca
     1261 cttgaaacat gcacatgtac ttacaccaag acacacatgt acaagtgcat ataatgtacg
     1321 taagagtgat ctcatataca tgcctttgaa tgtactgata ggaactaata tgcatatgca
     1381 cgtgaacatg caggagatac agcaaaatta ggggaatgag aaaaaagaaa ctgagaagat
     1441 gtcacacaga agataaaggg ggaagaaaca caactgcaat tcattttgac aagtgaacaa
     1501 gatagtaatt aacaataaaa ctggtgacca gtctggagtt ccatggaatt ctgagcacat
     1561 gcacatgaca cagactcccc tggttactgg agctaaacac tgactcacac actctgtatg
     1621 aaggacagag ctgctcaggg gaagaacggg gaatgatttg cacacaccac tgggagcagc
     1681 agagaaagaa aagacagttc tagaggaaga gatggaatac cagtgagtga ggaagctgag
     1741 gaactaggga acaggttggt agccacatta catagggcgg gggcagaaat agagtcatgt
     1801 tcccatttcg cttggttgct gtgacaaaca ccatgaaaac atgttattaa gggagcagaa
     1861 agttttcctg taggtgacaa gtcacaggcc atcattgtac agtcaggaca aggattcaag
     1921 ctggaattca taagacacaa cagaggatga acccctcctg aaagattgct agggggttgc
     1981 tttcatctca taaggtggcg acagtgggtg agccagctgt ttacagcaag ctgcaaacct
     2041 ctgtgcttaa gccctaaaat gatcatggtg ttggaaactg actctgagag acaatcccta
     2101 tgcaggcaca ctgacattgt ggggctgctg gctgtcacag gcatgaatgt gatctcattc
     2161 cacacagaac acatacaagt catgtaaaag caagaaatca tgcctagggt tgatggtaca
     2221 ttgggctagg taggccagag ctttgatggg ggttacagat gcggttccaa aggagggaat
     2281 ctggttgcaa agctgagatg ctgtttatat acaggtatct ctgggagcag tagagtagaa
     2341 aacacatgta tacctgtgta gacttgcgaa cctgggaagt gggaaagaaa ctaggagccc
     2401 tttaataaag tgccgttaaa gaagtgacag ttatagaatc accctcatgg ccatgaccta
     2461 acaatagaaa accttggtaa ccaggcaacc cactggttac agcaaggact ataggctctc
     2521 tggtcagaga ctgtagagag ggcaggatgt tctctttcca tcttcggact actcgaggtt
     2581 caggcctcaa gaaagacaac agggaagccc atgaaggtgt ctggaggcac agggttcgct
     2641 cttgccttca acgcctgtgg ccattttctc aaaggggaaa aaatttgacc aaagccagcc
     2701 aaggacagga cctcattgaa cagggtaaga actcttctga cacacaggac atgagaaagc
     2761 cctgtagaca ctcagacatt agttcaggga ctgtggttaa gctggtgaac aacttggtgc
     2821 cttctctgca gaaaggggac cccagctttg tccctgcatt tctgtccaca taccgaagat
     2881 gtgccaccac cctacaggta ttggatctgc tattcctgag gtattcacac ttcacagctg
     2941 attctgagga ggatgaacaa gtaaagaaca ccctctgtag cttcctggaa acatggatgg
     3001 acaagaaccc tgaggacttt tgtgacctat cagacctgtt gcctctgaaa tacctgaagg
     3061 cctacttgag tgtgtacatg ccccactgtg atcttagtgt tcgtgtcaag aagctcctga
     3121 cacagttgga ggaagaacat gccaaggatt cccaggtcaa agatgaggac gactcagatt
     3181 tggggacaca tatttcctca gatccagaga ttttatgggt gtaaatcagc aaagaaaaga
     3241 gccactctgt agccagaacc aacttgtgca ccagagctgt acggtataga aacctccaga
     3301 aggttctggg atttatgagt agttgcagct gtatgtggca gcagcagttc agccagcaca
     3361 gctgatagca gctgtggaaa ctgtgtctcc ctgtgtctgt agatacaagg tatctgtctg
     3421 tcatctcctg cttgctacag tgggccttcc tatttagagt atagccctgt cacctgtgat
     3481 catcaactgg agtctctcct atacttgccc ctcatgatca gctgctgatt taaatccaac
     3541 agcagttcca accccacagc cagactaaag ctcccccgag taatagtatt ttattatttc
     3601 tgatgttttc aatgttgtgt ttattttaat tattggtttt aataaattat taatttgttt
     3661 tacattgtcc aaaatgcagt ctaattatga aagaaaatat ctgaaaacta tggatattct
     3721 tgacaaatta ttttaagttt attcaaagtt gtctaaaaaa ttaaaaagtt aaacataatc
     3781 atttaaaatg attgtatgac aggctgatac tataaaaggt aaaactttta aatagccatt
     3841 tttgtaaata atgtatagac atcactaata agttgcatgt aataatgttc aacattacct
     3901 ttcagtaaac ttcaaactaa acttgagaag tggtaatact ttagtcagtg ttaacaattc
     3961 aattctaatt gaagtggata catttttaca tgcagatatt ccaagtgttg gggaggatgg
     4021 gcaatcataa aatcctggca catttctagg gggcatgtgg aaggcattac ctactttcag
     4081 taatactttg ccagttcttc aaaaatataa atacaactaa catgactttg ctcatctaaa
     4141 gatgtataaa taccccaaag aatgaaaatc agaaatccaa actgcacaaa tggtctgcta
     4201 tagatgagca tattaattgt actatgtgct aattcatgat acagcatggg caaggttcaa
     4261 agttactgtg ctaaggcaag aagccaaatt aaaaaagaaa aacaggcaga ataaaaattg
     4321 aataattcaa tatttaaata ataataaaat attaaaagta aattacaaaa agttgtgata
     4381 ggacattatg agaccagaaa cctccttcat atttgtaaat ggattcattt ttttgttgga
     4441 tatttgctga tgaacatgag gactgtacct aaaaggagtt tgtttcttta gagactccct
     4501 tagaaaaaaa ctaaactaaa ttgcaaggtg ttatcaattg gagataatcc tggtttaaga
     4561 atgggtacat gaggccactt ctccaattta gaactgtgtg ctccaaggtg tcttactcta
     4621 cataatgtct gcttatgggc ctcagtatgt cttgtgatct gattgaggag gaagcttctc
     4681 taaatttggt aaaacaaggc actggtctgt gagtataaca gatctttggg aatcattttc
     4741 taatatttct tttctagaac agtcatatta agatttaccc taggttgatg aaatatctgg
     4801 tctcaggttc ctggtcagcc aagcagtgtc aggtatgagg tccatctcag ggagtgaatc
     4861 ttaagtcaag tctgatatct gttggttact cccacactat ttgtgtcaca ttagtacatg
     4921 catatcaaca gactgaatat cattgaaatt caaatgtttt gtagtttggt tactgtttag
     4981 ggttctttct tgaaaacttg aagtttcagg tggtaacaac ttccagtaag acaagaaatt
     5041 aaaactttgg tatttttaca tctcagactg tactttccaa cttctggacc attcatcatc
     5101 tcaaagctag gaatatgtgt aagctcagtc aaactctcca tgctttgcct ctccactgga
     5161 gatgttcaaa ggctgggggg acatggacta acaattcaga tcaaatggaa ttctcaacag
     5221 aattctttca cttaaagaaa tgaacttgga gaaaagttca acatccttag tcatcagcaa
     5281 aatacaaatg aaatgaattt gtcattccat cttacctgtc agaattgcta aaacctaaca
     5341 aaagtgatag cttatgctaa cagggatgta gagcaaggag aacattatcc attgctgatg
     5401 gaagtgccaa cgtgtacaac aaacttcaga acttaacaca ttggtattgc aatagcatgc
     5461 atatgagtcg tcatttgata aactatgttc atacaaactt tattgctaat agctagaagc
     5521 gtcctaaagt ccttcaactg aagaatggat aaagaaaata ttttacattc ccatgctaaa
     5581 atattccaaa acttttaaaa tcaacatctt gttccatcca ggcatataaa tggaacaaga
     5641 agacagatat aatataaact tacttaaatg atgaaattac ttttaaaata aagaacaagt
     5701 atgctacagt ccacagaccc aggaaactat gtaacaaaga gggctcaaga tgcaggcctc
     5761 tctgtgatgg ggagatagaa aagacatctt tcttggctgt attgtggtgg gtgtagttaa
     5821 ggaagtggtc taaatggagg gtagggatgg gaaaaggata aaccagattg ggaggataac
     5881 tggagagagt actgggagaa aaaaattaga attagtgggt atctctggga caagctggaa
     5941 acctggaacc ctagtgcaat ggaaactact aggaaactat gaggggtgac accagcttag
     6001 tttcctagta gtatattgag ccttctccta taaccagaat gtcttccagt ggacagatta
     6061 ggatatcagc ccagccacaa aaattttcac ctacattttg tacagtctac aagatgtgct
     6121 gtagtgaagg tagcacagag ttatgaaagt gtctatccaa tgccttgaca catgtgagac
     6181 ccaggccatg agagaggcac tcccctcaaa gcctggagaa ccaagaacca gaggtaggac
     6241 atccccgaga cacgggtgaa cacagagaca ggatagaata aatccaatga aatgatttct
     6301 aataatattc tgatacactc ggagactggt gctaacccaa ttgtcatcag agaatcttca
     6361 cttaaaaact gatggtaaga agtgcaaaac acagagccag acattaggta gatcttggaa
     6421 aattttgtgg aaaagttgaa aaaatttttg taggatcttt ggggaaaagg tcaccttaag
     6481 agacagaaac ggagagagaa acacagaaag tagagagaca cagggctata ctccagcatg
     6541 cagagtcaga gtcacacaga aacagagaag gaaattagag gaagcattca agaacacaaa
     6601 agtatgtggt tgtctccatg aattctattt ataagggtat ttaaaaactt tccctcccct
     6661 ctttcagggt tggttagttt gaaaaaagac taaatgggtg actggctgat agatttggca
     6721 taaacatgtc ctgatcagcc ataattcaaa gcccatatct gaacatagta aaagcaatac
     6781 acagaaaact agtagcctgc agtacactaa gtggagagaa actttaagca accccactac
     6841 actcaggtaa taaatgaggc tgcccatcct ctccctacct attaaatata atagttgaag
     6901 tcctagccag agcaattaga caacaaaatg aggtcaaagg gatataaatt ggaaggaaag
     6961 aagtcgaaa
//
