LOCUS       XM_039091196             894 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L4
            (L1) (RGD1562598), mRNA.
ACCESSION   XM_039091196
VERSION     XM_039091196.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..894
                     /gene="RGD1562598"
                     /note="similar to 60S ribosomal protein L4 (L1); Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins, and 51% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:363962"
                     /db_xref="RGD:1562598"
     CDS             1..894
                     /gene="RGD1562598"
                     /codon_start=1
                     /product="60S ribosomal protein L4-like"
                     /protein_id="XP_038947124.1"
                     /db_xref="GeneID:363962"
                     /db_xref="RGD:1562598"
                     /translation="MACARPLMSVYSEKGESFVKNVTLPAVFKDPIQLDAVNFVHTNL
                     RKNNRLPYAVSELAGYQTCAESWGTGRAVALIPRVRAAGTHHSGQGAFANMCRADRMF
                     APTKTWRRWHRRVNTTQKRYTICSALAASALAALVMSKGHHVEEVPELPLLVEDKKTK
                     EAVQLLKIFKGWNDMKEVYVSQRMRAGKGKMRNRWRIQHRGPCVICNEDNGIIKAFKN
                     FPGITLFNVSKLNILKLPPGGHVGHFCIWTESAFRKLDELYGTWHKAVSLKSNYNLPM
                     HKMMNTDLSRILKSPEIQRAL"
ORIGIN      
        1 atggcttgtg cccgtcccct catgtcggtg tactctgaaa agggggagtc atttgtcaag
       61 aatgtcactt tgccagctgt gttcaaagat cccattcaac tggatgctgt gaactttgtt
      121 cacaccaact tgaggaaaaa caacagactg ccctatgctg tcagtgaatt agcaggttat
      181 cagacctgtg ctgagtcttg gggtactggc agagctgtgg ctctaattcc aagagttcga
      241 gctgctggca cccaccattc tgggcagggt gcatttgcaa acatgtgtcg tgcggaccgc
      301 atgtttgcac caaccaaaac ctggcgtcgt tggcatcgca gagtgaacac aactcagaaa
      361 cgatatacca tctgttctgc cctggctgcc tcggccttag cagctttggt gatgtctaaa
      421 ggtcatcatg ttgaggaagt tcctgaactg cctttgttgg ttgaagataa gaagaccaag
      481 gaggctgttc agctgcttaa gatatttaaa ggttggaatg acatgaaaga ggtctatgtc
      541 tcccagagaa tgagagctgg caagggcaaa atgagaaatc gatggcggat ccagcacagg
      601 ggaccctgcg ttatctgtaa tgaagataat ggaatcatca aggccttcaa aaacttccct
      661 ggtattactc tgtttaatgt aagcaagctg aacattttga agcttcctcc tggtgggcat
      721 gtggggcatt tctgcatttg gactgaaagt gctttccgga agttggatga gttgtatggc
      781 acttggcata aggctgtttc cctgaagagt aactacaacc tccctatgca caagatgatg
      841 aacacagacc ttagcagaat cttgaaaagc ccagagatcc aaagagccct ctga
//
