LOCUS       XM_039080586             544 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S18
            (RGD1562404), mRNA.
ACCESSION   XM_039080586
VERSION     XM_039080586.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080586.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..544
                     /gene="RGD1562404"
                     /note="similar to ribosomal protein S18; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:314556"
                     /db_xref="RGD:1562404"
     CDS             83..541
                     /gene="RGD1562404"
                     /codon_start=1
                     /product="40S ribosomal protein S18-like"
                     /protein_id="XP_038936514.1"
                     /db_xref="GeneID:314556"
                     /db_xref="RGD:1562404"
                     /translation="MSLVIPEKFQHILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVV
                     LRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLDRQKDVKDGKYSQVLAKG
                     LDNKLHEDLERLKKIRAHRGLRHFWDLRVGGQHSKTTGRRGHTVGVSKKK"
ORIGIN      
        1 tttttttttt gttttatcac actttattag aaatccatgc tcttccacag gaggtctaca
       61 cgccgccgct tgtgccgccg ccatgtccct agtgatcccc gagaagtttc agcacatcct
      121 gcgagtactc aacaccaaca tcgatgggcg gtggaaaata gccttcgcta tcactgccat
      181 taagggtgtg gggcggagat acgctcatgt ggttttgagg aaagcagaca ttgacctcac
      241 caagagggct ggggagctca cggaggacga ggtggagcgt gtgattacca tcatgcagaa
      301 cccacgacag tacaagatcc ccgactggtt cttggacaga cagaaggatg tgaaggatgg
      361 gaagtacagc caggttctgg ccaagggtct agacaacaag ctgcatgagg acctggagcg
      421 gctgaagaaa atccgagccc atagggggct gcgccacttt tgggaccttc gtgtcggcgg
      481 tcagcactcc aagaccactg gccgcagggg ccatactgtg ggtgtgtcca agaagaaatg
      541 agtc
//
