LOCUS       XM_039100866             507 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L27a
            (RGD1562402), mRNA.
ACCESSION   XM_039100866
VERSION     XM_039100866.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100866.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..507
                     /gene="RGD1562402"
                     /note="similar to 60S ribosomal protein L27a; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 ESTs, 86 long SRA reads, 26 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:499133"
                     /db_xref="RGD:1562402"
     CDS             27..473
                     /gene="RGD1562402"
                     /codon_start=1
                     /product="60S ribosomal protein L27a-like"
                     /protein_id="XP_038956794.1"
                     /db_xref="GeneID:499133"
                     /db_xref="RGD:1562402"
                     /translation="MPSRLRKTRKLRGHVSHSHGRIGKHRKHPGGLGNAGGMHHHRIN
                     FDKYHPGYFGKVGIRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIID
                     VVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA"
ORIGIN      
        1 gttgctcttt cttttctgcc accgccatgc catccagact gaggaagacc cggaaactcc
       61 ggggccacgt gagccacagc catggtcgca tcggtaagca ccgcaagcac ccaggaggcc
      121 tcgggaatgc tggaggcatg catcaccaca ggatcaactt tgacaaatat catccaggtt
      181 acttcggcaa agttggcata aggcattacc acttgaagag gaaccagagc ttctgcccaa
      241 ctgtcaacct ggataaatta tggacattgg tcagcgagca gacacgggtc aatgcagcaa
      301 aaaacaagaa tggagttgct cccatcattg acgttgttcg atcaggctac tacaaagttc
      361 tggggaaggg gaagctccct aagcaacctg tcatcgtgaa ggccaagttc ttcagcagaa
      421 gagctgaaga gaagataaag ggtgtgggag gtgcctgtgt cctggtggct taaagccact
      481 tcagaggcta attaaatgca aacattt
//
