LOCUS       XM_576917               2132 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA C330016H24
            (RGD1562289), transcript variant X1, mRNA.
ACCESSION   XM_576917
VERSION     XM_576917.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_576917.8.
            
            On Jan 21, 2021 this sequence version replaced XM_576917.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2132
                     /gene="RGD1562289"
                     /note="similar to RIKEN cDNA C330016H24; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 6 Proteins, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:501516"
                     /db_xref="RGD:1562289"
     CDS             102..1250
                     /gene="RGD1562289"
                     /codon_start=1
                     /product="endosome-associated-trafficking regulator 1-like
                     isoform X1"
                     /protein_id="XP_576917.1"
                     /db_xref="GeneID:501516"
                     /db_xref="RGD:1562289"
                     /translation="MSGYARRQGAPPLSRTRSLVVPDDFGYGKGKCTKQGPSGAHETR
                     FGGDKLEDLEEANPFSFKEFLKTKNLSLSKEDTATSRIYPKEASRHPLGLDHNSPVSQ
                     PMGYGLEYQQPFFEDPTRASNLEEDEEDGWSRAYLPSAVEQTHSMRATQNSSPCGTYL
                     SFFSNASELAGPESLPPWTLSDTDSRLSPASPAGNPNVDFAAHEESLGDRHLRTLQLS
                     YEALKDENSKLRRKLSEVQSFSETQTKMVRTLERKLEAKMIKEESDFHDLESVVQQVE
                     QNLELMTKRAVKAENHVMKLKQEVNLLQAQLSNFKRENEALRSGQGASLTVVKQNTDV
                     ALQNLHVVMNSAHASIKQLVSGAETLNLVAEILKSIDRITEVKDEADS"
ORIGIN      
        1 atgagagagg ccggcaggct tccggccggc cgcgccggat gaggcagggg ctggcgacgg
       61 cgttgtgggc catggggccg cggccgggtt agggcacggc gatgtcgggc tacgcgcggc
      121 ggcagggcgc gcccccacta tcgcggacgc ggagcctcgt agttcccgac gattttggct
      181 atggaaaggg gaaatgtact aaacaaggtc cgtcgggagc ccatgagacg cgctttggag
      241 gtgacaaact tgaagacctt gaagaagcca atccattctc cttcaaagag tttttgaaaa
      301 ccaagaacct cagcctgtca aaagaagaca cagccaccag tcgaatttac ccgaaggagg
      361 cctcgaggca cccactggga ctagaccaca actcccctgt ctcccagccc atgggatatg
      421 gcctggaata tcagcagcca ttttttgaag acccaacaag agccagcaac ctagaggagg
      481 atgaagagga cgggtggagc agagcctacc tgccgtctgc cgtggagcag actcactcca
      541 tgagagccac gcagaactca tcgccctgtg gcacctacct ttccttcttt tccaacgcgt
      601 cagagctggc aggtcctgag tctttgcccc catggacact gagtgacact gactccaggc
      661 tctccccagc gtctccagct gggaatccta atgtagactt tgcagctcat gaagaatcct
      721 taggggacag acacctgcgg acgctgcagt taagttacga agcactgaaa gatgaaaact
      781 ctaagctcag aagaaagcta agtgaggttc agagcttctc tgaaactcaa acaaaaatgg
      841 tcaggacgct cgaacggaag ttggaggcga agatgatcaa ggaagagagt gacttccatg
      901 acctggagtc agtagtccag caagtcgaac agaacctcga actgatgacc aaacgggctg
      961 taaaagcaga aaatcatgtc atgaagctga aacaggaagt aaatttgctc caggcacagc
     1021 tctccaactt caagcgagaa aacgaagccc tgcggtcagg ccagggtgcc agccttaccg
     1081 tggtgaagca gaacaccgat gtggccttgc agaacctcca tgttgtcatg aacagtgcac
     1141 acgcatctat aaagcagctg gtgtctggag cagagacact gaaccttgtt gctgaaatcc
     1201 tcaagtctat cgacagaatt actgaagtta aggatgaggc agactcttga gaatacgacc
     1261 tgccgccggg tcccggcacc tctgcaccga tggcaccaca cagcttccaa ctgtgttcct
     1321 aactaagcag tcctcaccaa accatctcac agcctaagca cgtgaccggg cacctgcaat
     1381 acagggctcc tttccaccgg ttgcacctaa cagtttacat gaagtccttt ggggaagtcc
     1441 cactgtttga tagactcact gatttactgg aagacatttt tataaaaccc agcaattttt
     1501 agaaagcact aaagctgaaa caacagtttg gtaaaaagct tcttccactg tcccctcaga
     1561 tttacctata ggatgagctc cggctcaggg ccagttttac taagcagaac actaagtgag
     1621 ccagtgtgga agcgagcagc ctgtacagga ctcttgctgt cactctgcct cacgaacaga
     1681 cgttgacatt gtggccttca cggacggctc ctgctgtcag cagcctcacc gaggcagcac
     1741 cactcggtag atgctgctgt cctaccagga ccctagtacc aaagtcacag actgcattgc
     1801 agagcgtcac acacgcacta ctctgggcta ccagcttcgg gaagccattt gaggctgttg
     1861 gttttgatga gtgttaacgt gtcagtgcat cttttgcata gtgcggttca gactggaatt
     1921 agagcacaca cctacctgcc tcaggtcagc accagttctt tgggctggct ggctggtttt
     1981 gaaggacaag cagacaaaag cagcaccctg tgctgtgctg aggggtcagg gtttggggac
     2041 cactttccta tagatttttt aaatttccct cttcccctcc tgttgagatc aacagctttc
     2101 ttatctaaat aaatcttgaa gatcaaaaaa aa
//
