LOCUS       XM_039098133             502 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S18
            (RGD1561919), mRNA.
ACCESSION   XM_039098133
VERSION     XM_039098133.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098133.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..502
                     /gene="RGD1561919"
                     /note="similar to ribosomal protein S18; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins, and 90% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:307665"
                     /db_xref="RGD:1561919"
     CDS             1..459
                     /gene="RGD1561919"
                     /codon_start=1
                     /product="40S ribosomal protein S18-like"
                     /protein_id="XP_038954061.1"
                     /db_xref="GeneID:307665"
                     /db_xref="RGD:1561919"
                     /translation="MSLVVPKKFQHSLRVLDTNVDGQRKIALAITAIKGVGWRYAHVV
                     LRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDMKDGKYSQVLANS
                     LDNKLREDLERVKKIRAHRGLRHFWGLRVRGRHTKTTGRRGRTVGVSKKK"
ORIGIN      
        1 atgtccctag tggtccccaa gaagtttcag cacagtctgc gagtcctcga caccaacgtc
       61 gatgggcagc ggaaaatagc cttagctatc actgccatta agggtgtggg gtggagatac
      121 gctcatgtgg tgttgaggaa agcagacatt gacctcacca agagggctgg ggagctcacg
      181 gaggacgagg tggagcgtgt gatcaccatc atgcagaacc cacgacagta caagatcccc
      241 gactggttct tgaacagaca gaaggatatg aaggatggga agtacagcca ggttctggcc
      301 aacagtctag acaacaagct gcgcgaagac ctggagcggg tgaagaaaat ccgagcccat
      361 agggggctgc gccacttttg gggtcttcgt gtccggggtc ggcacaccaa gaccactggc
      421 cgcaggggcc gtactgtggg tgtgtccaag aagaaatgag cctttgggcc tttgctgtta
      481 ataaatagtt tatataccag tg
//
