LOCUS       XM_039090125             579 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein L27
            (RGD1561886), mRNA.
ACCESSION   XM_039090125
VERSION     XM_039090125.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039090125.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..579
                     /gene="RGD1561886"
                     /note="similar to ribosomal protein L27; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:363918"
                     /db_xref="RGD:1561886"
     CDS             117..467
                     /gene="RGD1561886"
                     /codon_start=1
                     /product="60S ribosomal protein L27-like"
                     /protein_id="XP_038946053.1"
                     /db_xref="GeneID:363918"
                     /db_xref="RGD:1561886"
                     /translation="MGKYMKPGKVVLVLAGCKAVTVKNIDDGTSDRPHSLVLVAGIDC
                     SPQKVTVTMGKKKIVKQFKIKSFVKVYNYNHLMPTRYSVDISLDKTVVNKDVFRDPAL
                     KRKARQEAKVKFEE"
ORIGIN      
        1 agcgcaaggc cctgggttcg gtccacagct ccgaaaaaaa gaacaaaaaa aaaaaaaaaa
       61 aaaaaaaaag atgaagactt aggctttctc ctgggtgctg actgcttgct gttgaaatgg
      121 gaaagtacat gaaacctggg aaagtggtgc tggtcctggc tggatgcaaa gccgtcaccg
      181 taaagaacat tgatgatggc acctcagacc gccctcacag ccttgtcctt gtggctggaa
      241 ttgactgctc tccccaaaaa gtgacagtca ccatgggcaa gaagaaaatc gtcaagcaat
      301 tcaagatcaa gtcctttgtg aaagtttata actacaatca ccttatgccc acaaggtact
      361 ctgtggatat ctccttggac aaaactgttg tcaacaagga tgtgttcaga gacccagcat
      421 tgaaacgcaa ggccaggcag gaggccaagg tcaagtttga ggagtgatac aagatgggga
      481 agaacaaatg gttttcccag aagcttcgct tttagatgta tttttgtttt cgtcattaaa
      541 aattaaaaaa aaaaaaaaaa agggctggag agatggctc
//
