LOCUS       XM_006245836            1090 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RGD1561796 (RGD1561796), transcript
            variant X1, mRNA.
ACCESSION   XM_006245836
VERSION     XM_006245836.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006245836.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006245836.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1090
                     /gene="RGD1561796"
                     /note="RGD1561796; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 ESTs, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:360483"
                     /db_xref="RGD:1561796"
     CDS             184..741
                     /gene="RGD1561796"
                     /codon_start=1
                     /product="uncharacterized protein C16orf90 homolog isoform
                     X1"
                     /protein_id="XP_006245898.1"
                     /db_xref="GeneID:360483"
                     /db_xref="RGD:1561796"
                     /translation="MEALVCAFSELRIREDAVSWAPGRPSHPDTPPNIYEGGLGAQQQ
                     QGPSAQGSKPKNFRLRHLRSLALYLPGHMQPAGQCGSHWLGRLMAGGSLTRPEGSPWP
                     LALPQGTLGPGNGHCSALLEARLPRDSLGNTASSSSMDPAKGVPSQSGPPEGLGLRPK
                     RSWRALEETMCPLCKRTRSGALERT"
ORIGIN      
        1 ttcccacctg accagatacc atcgtctccc aaactaggag gtccagggag actagagtca
       61 ttactgtgac atcataagga ccagttgcca tgggagacct gcagacccag cccctaggca
      121 ggggagagca ggctctactg cacagaaggc ctggccactc ctcccccacc atactggccc
      181 tccatggaag ccttggtctg tgcattctct gagcttcgaa taagagaaga tgcagtgagc
      241 tgggccccag gacgccccag ccaccctgac acaccaccta acatctatga gggagggttg
      301 ggggcccagc agcagcaggg ccccagtgcc cagggaagca agcccaagaa cttccgattg
      361 cgacacctcc ggagcctggc tctctacctg ccaggccaca tgcagcctgc cggccaatgc
      421 ggaagccact ggctaggccg gctcatggct gggggcagcc tgacacggcc tgaaggctcg
      481 ccctggcccc tggccctgcc acaggggacc ctgggtccag gtaacggcca ttgctcagcc
      541 ctcctggaag cccgcctgcc cagggacagc ctgggaaaca cagcttccag ttccagcatg
      601 gacccagcca agggtgtccc ctcccagtct ggtccccccg agggcttggg actcaggccc
      661 aagaggtcct ggagagcctt ggaggagacc atgtgtccct tgtgcaagag aacccgctct
      721 ggggccttgg agaggacata ggaggcaaag ggccagggct ggggaacagt aggggaagga
      781 tggccgagga ggaggaggcc agggttactg aggaagggtt cagtcccaga ggcagccctc
      841 cccactgaga tggcccccag agttgcctag caccagacct gggctggtct ggggaaagca
      901 tgaggaggga gggagggagg aagaagatcc atgagaggga cagaagaaat ggaagcatgt
      961 cagtgccctt gcagcctgcc caaactccgg tcagccactt gtacctggga ggtcaggccg
     1021 agcagagaat cgggttcctg agaggccagg gagtcctcag gtctaatctc agtaaaagcc
     1081 aaggcctgca
//
