LOCUS       XM_039108497             480 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus high mobility group box 3 like 2
            (Hmgb3l2), mRNA.
ACCESSION   XM_039108497
VERSION     XM_039108497.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086022) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..480
                     /gene="Hmgb3l2"
                     /note="high mobility group box 3 like 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 Proteins"
                     /db_xref="GeneID:499998"
                     /db_xref="RGD:1561754"
     CDS             1..480
                     /gene="Hmgb3l2"
                     /codon_start=1
                     /product="high mobility group protein B3-like"
                     /protein_id="XP_038964425.1"
                     /db_xref="GeneID:499998"
                     /db_xref="RGD:1561754"
                     /translation="MQTFREVRKKRHPEVPVNFAEFSKKCFERLKTMSSKEKSKLDEK
                     AKMDKVRYDPEMKDYGPTKGSKRKKDPNAPQKTSVKIFFLFCSEFHPKIESTNPGISI
                     GDVAKKLGEMWNNLSDSEKQPYVTKAAKLRAKYEKDAADSKSKGKFDGAKGAAKVAR"
ORIGIN      
        1 atgcagacat tcagggaagt gcgtaagaag agacacccag aggttcccgt caattttgca
       61 gagttttcca agaagtgctt tgagaggttg aagacaatgt ctagcaaaga gaaatcaaaa
      121 cttgatgaaa aggccaagat ggataaagtg cgctatgatc cggagatgaa agattatggg
      181 ccaactaaag gaagcaaaag gaagaaggac ccgaatgccc cccaaaagac ttccgtcaag
      241 atttttttct tattctgctc cgaattccac cccaagatcg aatccacaaa ccctggtatc
      301 tccattggag atgtggccaa aaagctgggt gagatgtgga ataacttaag cgacagtgaa
      361 aagcagcctt acgttaccaa ggcagcaaag ctgagggcga agtatgagaa ggatgctgct
      421 gactctaagt ctaaagggaa gtttgatgga gccaagggtg ctgctaaagt tgcccggtaa
//
