LOCUS       XM_039087842            1185 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to keratin associated protein
            2-4 (RGD1561684), mRNA.
ACCESSION   XM_039087842
VERSION     XM_039087842.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087842.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1185
                     /gene="RGD1561684"
                     /note="similar to keratin associated protein 2-4; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins, and 93% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:501721"
                     /db_xref="RGD:1561684"
     CDS             664..1185
                     /gene="RGD1561684"
                     /codon_start=1
                     /product="keratin-associated protein 2-1"
                     /protein_id="XP_038943770.1"
                     /db_xref="GeneID:501721"
                     /db_xref="RGD:1561684"
                     /translation="MIMCLGVISTVQVYKGTRPRGDITPENPQPLFTSQPHSSPDTTM
                     TGSCCGSFSSQSCGGCCQPCCCRDPCCCRPVSCQTTVCRPVTCVPHYTRPICEPCRRP
                     ICCDPCSLQQGCCRPITCCPSSCTAVVCRPCCWASTCCQPISVQAPCCRPPCCQPAPC
                     RTTCRTSPCNTCC"
ORIGIN      
        1 agtcaacaga tgctgtgact aatcctaaat aaattccgaa gataaaaatc tcgaggaatc
       61 cctgaagcag gttttaggat caaggtggaa gttgagttca ggttccgagg acaagaaggg
      121 cattccaggt caataagaaa acaagagcca ggactggaaa gccctgatac tcagcaggag
      181 agagtgatcg agccagtggg acagcctaca aatgcccatg tggtccttca tcacgtggga
      241 aaccacactc ctgccagaga tgcatcctga gagttctctg ggaagcagat gacgatggtc
      301 tggcttacag gggtgccatt aatctgctgc tgtcacaccc atgtgtacta atgaagtaag
      361 tcactgcttg ggtggcaagc cagagagcct ttgaaggcaa aatgatgaca tcagagttga
      421 ggagagagtg gttagatcat atctggttta gaaaacaaat tcgttcctcc ttgatgactt
      481 agaaatattt caaactcgtc ataattgaat ccagtgttta gattcagtaa gaataaacca
      541 caaaagaaaa taaagggata tttgtgatgt gtatgcatga tacgtagagg ggggaggggt
      601 agagacaaaa tttccattag tcaatgctaa ctcttctctt aattagccag aggatttaca
      661 agaatgatca tgtgcctagg ggtcatcagc actgtccagg tatataaagg gacccgaccc
      721 agaggagaca tcacacctga gaacccccaa ccactcttca cctctcagcc tcactccagc
      781 ccagacacca ccatgaccgg ctcctgctgt ggatccttct cctcccagag ctgtggaggt
      841 tgctgccagc cctgctgctg cagggacccc tgctgctgcc gcccagtgtc ctgccagacc
      901 actgtgtgtc gccctgtgac ctgtgtgccc cactacacta ggcccatctg tgagccctgc
      961 cgccgcccca tctgctgtga cccctgcagc ctgcagcagg gctgctgtcg ccccatcacc
     1021 tgctgcccca gctcttgcac agctgtggtc tgcagaccct gctgctgggc ctccacctgc
     1081 tgccagccca tctcagtgca ggctccctgc tgcaggcccc cctgctgcca gcctgctccc
     1141 tgtcgcacca cctgcaggac ctccccctgc aacacctgct gctga
//
