LOCUS       XM_039108621             330 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38
            (RGD1561636), mRNA.
ACCESSION   XM_039108621
VERSION     XM_039108621.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108621.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..330
                     /gene="RGD1561636"
                     /note="similar to 60S ribosomal protein L38; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 long SRA reads, 14 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:502741"
                     /db_xref="RGD:1561636"
     CDS             66..278
                     /gene="RGD1561636"
                     /codon_start=1
                     /product="60S ribosomal protein L38-like"
                     /protein_id="XP_038964549.1"
                     /db_xref="GeneID:502741"
                     /db_xref="RGD:1561636"
                     /translation="MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYT
                     LVITDKEKVEKLKQSLPPGLAVKELK"
ORIGIN      
        1 tgttcttttt ccgttctgtt cggtgctcgc tcctgtgctg acaccagagc cgagcgcccg
       61 tcgccatgcc tcggaaaatt gaggaaatca aggactttct actcacagcc cggcggaagg
      121 atgccaaatc tgtcaagatc aagaaaaaca aggataatgt aaagttcaag gtccgctgta
      181 gcaggtacct ctacaccctg gttatcacag acaaggagaa ggtggagaag ctgaagcagt
      241 ccctgccccc aggtttggca gtgaaggagc tgaaatgaac aggacctctg catgtgacta
      301 ttaaaaaccc cgaaaagtca aaaaaaaaaa
//
