LOCUS       XM_039092700             908 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5730434I03 gene
            (RGD1561589), mRNA.
ACCESSION   XM_039092700
VERSION     XM_039092700.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092700.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..908
                     /gene="RGD1561589"
                     /note="similar to RIKEN cDNA 5730434I03 gene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 long SRA reads, 16 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:305284"
                     /db_xref="RGD:1561589"
     CDS             26..520
                     /gene="RGD1561589"
                     /codon_start=1
                     /product="transcription factor BTF3 homolog 4-like"
                     /protein_id="XP_038948628.1"
                     /db_xref="GeneID:305284"
                     /db_xref="RGD:1561589"
                     /translation="MRFTNSMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKK
                     LQGSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITE
                     MLPGILSQLGADSLTSLRKLAEQSPRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASK
                     NEAN"
ORIGIN      
        1 tatccaggcc tagggacaca gccaaatgag atttaccaac agcatgaatc aagaaaagtt
       61 agccaagctt caagctcagg tccggatagg gggcaagggg acagctcgca ggaagaagaa
      121 ggtggtgcat aggacagcta ctgctgatga caaaaagctt cagggttcac taaagaaact
      181 ggctgtgaac aatatagctg gtattgaaga ggtgaacatg attaaagacg atggaacagt
      241 tattcatttc aacaatccca aagtccaagc ttccctctcc gctaacacct ttgcaattac
      301 tggtcatgca gaagccaaac caatcacaga aatgcttcct ggaatactaa gtcagcttgg
      361 tgctgacagc ttaacgagcc ttagaaagtt agctgaacag tccccacgac aagtattgga
      421 tagtaaagca cccaaaccag aagacattga tgaagaggat gatgatgttc cagatcttgt
      481 agaaaatttt gatgaagcat caaaaaatga agctaactaa aatcttctgg gttttggaag
      541 ctggcatgga ctagatttaa caatcagctc tgttgttcca aagttttaca gacatggaga
      601 acatcacctg ttattagttc cgtaatataa atattttgta tattaatgat gctgttttat
      661 cagcatttct tggtcattgg attttgcatt ttgcacttct tcccaggatc aattcttttg
      721 gtcaaaatat gaagtattgg tacaggttga gggtggtttt tgttttttgg gggggacttt
      781 tggtgtgtat gtatatgtat gtgtgtgggt atgtgtgtac acagtggaca gcagattgga
      841 taacagttat atctatcgta tcccttcccc caatagaaat aaagcaaatc tttacaaaaa
      901 aaaaagaa
//
