LOCUS       XM_039103295             900 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Ab2-162 (RGD1561520), mRNA.
ACCESSION   XM_039103295
VERSION     XM_039103295.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103295.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..900
                     /gene="RGD1561520"
                     /note="similar to Ab2-162; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:365682"
                     /db_xref="RGD:1561520"
     CDS             25..867
                     /gene="RGD1561520"
                     /codon_start=1
                     /product="ferritin light chain 1-like"
                     /protein_id="XP_038959223.1"
                     /db_xref="GeneID:365682"
                     /db_xref="RGD:1561520"
                     /translation="MKLLEERVGGPVDLCIASAVFASTVLASLQVLQSQSPGPSPCHL
                     GLLGPASTISPSSRLGSYLGSAMTSQIRQDYSTDVEAAVNRLVNLHLPVSYTYFSIGF
                     LFDRSDVALEGVGHFFLHKLAEDKSKGTGHFLKLWNDHGVWSGGWALFQDVQKPSQDE
                     WSKTQETMEAALAPEKNLNQDLLGLHSLGSAGTDPHLCDFLERHFLDKEVKLIEKMGN
                     HLTHLCRVAGSKPAQIGMPLASLGEYFFECLTLKHSASPQGLPPLLCTRRLRTSTCMN
                     HSSH"
ORIGIN      
        1 tattttcagg ttgtagttat agaaatgaag ctactggagg agcgcgttgg aggtcccgtg
       61 gatctatgta ttgcttcagc agtgtttgct tccactgtat tagcttcctt gcaagtcctc
      121 cagtcgcagt ctcctggacc atctccttgc caccttgggc tcctaggacc agccagtacc
      181 atctcaccat cttcgaggtt aggctcatac ctgggatcag ccatgacctc tcagattcgt
      241 caggattatt ccaccgatgt ggaagctgcc gtgaaccgcc tggtcaactt acatctgcca
      301 gtctcctaca cttacttctc tatcggtttc ctttttgatc ggtctgacgt ggctttagag
      361 ggcgtaggcc atttcttcct ccacaaattg gcggaggata agagcaaggg cacagggcat
      421 ttcctcaagt tgtggaatga tcacggggtt tggagtgggg gttgggcact cttccaggat
      481 gttcagaagc catctcaaga tgaatggagt aaaacccagg agaccatgga agctgccttg
      541 gccccagaga agaacctgaa ccaggacctc ttgggtctac attccctggg ttctgctggc
      601 acagaccctc acctctgtga cttcttggaa agacactttc tggataagga ggtgaagctc
      661 atcgagaaga tgggcaacca cctgacccac ctctgtaggg tggcagggtc aaaaccagcg
      721 cagattggca tgccccttgc atctctgggc gagtatttct ttgagtgcct cactctaaag
      781 cactctgctt ctccccaggg gcttcctcct ctgctctgca ccagacgcct caggacctcc
      841 acctgcatga accactcaag tcactaggta gctttgtaac tgccctggaa cctctcccaa
//
