LOCUS       XM_039111568             367 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2900010J23
            (RGD1561465), mRNA.
ACCESSION   XM_039111568
VERSION     XM_039111568.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111568.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..367
                     /gene="RGD1561465"
                     /note="similar to RIKEN cDNA 2900010J23; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:502987"
                     /db_xref="RGD:1561465"
     CDS             104..352
                     /gene="RGD1561465"
                     /codon_start=1
                     /product="DNA repair protein SWI5 homolog"
                     /protein_id="XP_038967496.1"
                     /db_xref="GeneID:502987"
                     /db_xref="RGD:1561465"
                     /translation="MIDEGEEVTEETLNSDIQKLKEKQDMLDKEISQLIAEGYRVIEF
                     YEYNNIKNTSQMLPGKPTVTRGVTTKESYLDFDLNPND"
ORIGIN      
        1 acgctgctcc gggtgtcccg ggaccttagg gttcaggagg ggtgagtcag aattcagccg
       61 aatttaccat gggggctacc gatcacccca acggccattc cccatgattg atgagggtga
      121 ggaagtcacc gaggagacct tgaattctga cattcagaaa ctgaaggaga agcaggacat
      181 gctggacaag gagatctccc agctaatagc agagggctac cgtgtgattg agttctatga
      241 atacaacaac atcaagaaca cgtcgcagat gctgccgggc aaaccgactg tgactcgagg
      301 tgttaccacc aaggagtcat atctggattt tgatctaaac ccaaatgact gagcagctcc
      361 tcggaga
//
