LOCUS       XM_008759258            1336 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ABO histo-blood group B
            transferase (RGD1561430), transcript variant X1, mRNA.
ACCESSION   XM_008759258
VERSION     XM_008759258.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008759258.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008759258.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1336
                     /gene="RGD1561430"
                     /note="similar to ABO histo-blood group B transferase;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:365229"
                     /db_xref="RGD:1561430"
     CDS             520..1206
                     /gene="RGD1561430"
                     /codon_start=1
                     /product="histo-blood group ABO system transferase-like
                     isoform X1"
                     /protein_id="XP_008757480.1"
                     /db_xref="GeneID:365229"
                     /db_xref="RGD:1561430"
                     /translation="MLYYPSKLIVPSRANIAIQTPWLAPIVWDRTFQIGILNQQFWLQ
                     NVSIGLVVFTTGACIAFLKVLLQTSETYFMQGHRVKYYPFNGQPASLPTLKPCKGRQM
                     VILEIQASAHQLDTYVCRVEMISHLSQHHFVKEVDYLVCVCVNIIFCHTVGVKVLSSL
                     FDTLHPLVFGLPRKSLAYERQPQPQAYISEDEGAFFGGKVLEIYRLTKFHYQAVMMDQ
                     AHYIEVMKAT"
ORIGIN      
        1 gtctcctgag catgtttcag gaatccagag ctatgaccta tcagctgctt ctttgtgatc
       61 cggtgagtga atcctgccat gtggtgtctg tgagagcacc agagaaacag aaactcacat
      121 ttttggatct ctgctgccat ttttgagact tccttcatgt gaaccacgtg gtgcctgaca
      181 cgccagtgtt gggcagtttg gagggctgct ggaggagtag gctgtgtgtt ggggacttgg
      241 atagtacaga accttggatt gggcccatcg tacccagaag aagttaccct tatgccatgg
      301 aggagacagc aacagccatg acccaaccag tgcagaaatc tgagaaattc aagtatcatt
      361 cccatcttac tgtggccttt gttttcctac tagccctcat gctggccttt tttgcctatg
      421 ctgtcctgat cctgggaaag cagaagcaga tatagactct ggccaaggac agcatagcag
      481 ttagagaacc acttcctgaa aatagtgaat gtgcccagga tgttgtatta tccatcgaaa
      541 ttaattgttc ccagcagggc aaacatcgcc atacagactc cctggctggc tcccattgtg
      601 tgggacagga ctttccaaat tggaatcttg aaccagcaat tctggctcca gaatgtctcc
      661 attgggttag ttgtgttcac cacaggagca tgcatagcct tcctaaaagt gctcctgcaa
      721 acctctgaga catacttcat gcagggacac cgagtaaagt actacccttt caatggccag
      781 ccagctagcc ttccaacctt gaagccctgt aaggggaggc agatggtaat tctggaaatt
      841 caggcttctg cccatcagct ggacacttat gtgtgcagag tggagatgat cagccatctt
      901 tcccagcatc actttgtgaa ggaggtggac tacctggtct gtgtctgtgt gaacatcatc
      961 ttctgccaca ctgtgggtgt gaaggtcctg tcctccctgt ttgacacact gcatcctctc
     1021 gtctttggac tcccgagaaa atccttggcc tatgaaaggc agcctcagcc acaagcctac
     1081 atttctgagg atgagggagc cttctttggg ggaaaggtac tggagattta caggctcacc
     1141 aagttccatt accaggctgt gatgatggac caagctcatt acatcgaagt gatgaaagct
     1201 acttgaactg tctcctttac cacaagccca ctaaggtcct ctctcctggg gcacacccac
     1261 catctggatg gtaaaaagat caatacgctt ccatgttgag tccctttgaa aataaactgt
     1321 tgacgtaatg agtctt
//
