LOCUS       XM_228595               1378 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Smage-1 protein
            (RGD1561382), mRNA.
ACCESSION   XM_228595
VERSION     XM_228595.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_228595.6.
            
            On Jan 21, 2021 this sequence version replaced XM_228595.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1378
                     /gene="RGD1561382"
                     /note="similar to Smage-1 protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:302432"
                     /db_xref="RGD:1561382"
     CDS             29..1144
                     /gene="RGD1561382"
                     /codon_start=1
                     /product="melanoma-associated antigen B4"
                     /protein_id="XP_228595.5"
                     /db_xref="GeneID:302432"
                     /db_xref="RGD:1561382"
                     /translation="MPRSHKGKGRSRTKRQNVQERSQSLDVAHTTAKEEPTSSIGQGD
                     PPSSPDSCIYQGTQANVASVSDHLSVFSTSAVYAEASGPNAVSVSDDLSMLPIGVVGG
                     ETSRINAEASIISSLQRSRTFTIGSTTHSARRDPLNRKASVLMAFMLEKFRVKEHFTE
                     KDMLKVINKKYKAHFPEIIRRISVHLELVFGLELKEVDPNSQSYTLVGILGLSTEGNL
                     RGSSGLPKTGLLMTLLAVIFMNGNISSEEDIWEFLKVVGIFPGRNHPIFGEPREFITK
                     DLVKENYLEYHRVCGIDPPKYVFLWGSRAHAETTKMNVLKVLAKINDGIPSSFPCLYE
                     EALIDEANRAARRVTAVPGNASDSPHLGYITHNLSYV"
ORIGIN      
        1 tgtcctggta cccttgagcc aagtcatcat gcctaggagc cacaagggta aaggtcgctc
       61 tcgtaccaaa cgtcaaaatg tacaggagag gagccaaagt cttgatgttg ctcatactac
      121 tgcaaaggaa gaaccaacat cttctattgg tcaaggggat ccgcccagct cccctgatag
      181 ctgtatatac cagggtactc aggcaaatgt agcctctgtt tctgaccact taagtgtatt
      241 ctcaacaagt gctgtgtatg ctgaggcttc tggtccaaat gcagtctctg tttctgacga
      301 cttaagtatg ctcccaatag gtgtcgtagg tggtgagact tctagaataa atgctgaggc
      361 ttctattata agctctctgc aacgttcacg caccttcaca ataggctcta ccactcattc
      421 tgcgcgcaga gatcctctca acaggaaggc aagcgtattg atggcattca tgctggagaa
      481 gtttagggta aaagagcact ttacagagaa agatatgttg aaggtgatta acaagaagta
      541 caaagcacac ttccctgaga tcattcgaag aatctctgtg cacctggagc ttgtctttgg
      601 cctcgagttg aaggaagttg atcccaattc tcagtcatat acgcttgtgg gcattctggg
      661 tctctccacc gagggaaatc tgaggggcag tagtgggtta cccaagacag ggctcctgat
      721 gaccctcctg gctgtgatct tcatgaatgg caacatttcc agtgaggaag acatctggga
      781 attcctgaaa gtagtgggga tatttcctgg gaggaatcat ccaatctttg gggaacctag
      841 ggaatttatc acaaaagatc tcgtgaaaga aaattatctg gagtaccacc gggtgtgtgg
      901 cattgatccc ccaaaatatg tgttcctgtg gggttccaga gcccatgctg aaaccactaa
      961 gatgaacgtc ctgaaagttt tagctaagat caatgatggt attcctagtt ccttcccttg
     1021 tctatatgaa gaggctctga ttgatgaggc taatagagca gcaaggagag ttacagctgt
     1081 gcctggcaat gccagtgaca gtcctcattt agggtacata acccacaacc tctcctatgt
     1141 ctaactgcat ttgagagttt tacactctgt tgaagagtag tcagccttcc atatagtaga
     1201 atgcattcta agcttgtagt agcaaagttt taatcttatt gtgctgctat acatgagcaa
     1261 attacagata ttttattctt tgttatattg catatgatat ttaaccaaag ttaagtgatt
     1321 tacccgaagt taaggtatct tttaatcatc tcatagtcta tgtctttaca tatttttg
//
