LOCUS       XM_039101440             843 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L8
            (RGD1561333), mRNA.
ACCESSION   XM_039101440
VERSION     XM_039101440.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101440.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..843
                     /gene="RGD1561333"
                     /note="similar to 60S ribosomal protein L8; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, 30 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:499374"
                     /db_xref="RGD:1561333"
     CDS             34..807
                     /gene="RGD1561333"
                     /codon_start=1
                     /product="60S ribosomal protein L8-like"
                     /protein_id="XP_038957368.1"
                     /db_xref="GeneID:499374"
                     /db_xref="RGD:1561333"
                     /translation="MGRVIRDQRKGAGSVFRAHLKHRKGAARLRAVDFAERHGYIKGI
                     VKDIIHDPGRSAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVL
                     PVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISS
                     ANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVQGVAMNPVEHPFGGDNHQH
                     IGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKEN"
ORIGIN      
        1 cttttggcct tgcttgccgg cagactcgcc gccatgggcc gtgtgatccg agaccagagg
       61 aaaggtgccg gttctgtgtt tcgtgcgcac ttgaagcacc gtaagggcgc cgcgcgtctg
      121 cgtgctgtgg acttcgcgga gcgacacggc tacattaaag gcatcgtaaa ggacatcatt
      181 catgaccctg gccgcagcgc tcccctcgcg aaagtagtct ttcgtgatcc ctatcgattc
      241 aagaagcgga cagagctgtt catcgccgca gagggaatcc acactggaca gtttgtgtac
      301 tgcggcaaga aggcccagct gaatattggc aatgttttgc ccgtgggcac catgcctgag
      361 ggtactatcg tgtgttgtct ggaggagaag cctggggaca ggggcaagct ggcacgagcc
      421 tctgggaact atgctacagt catctcccac aacccagaga ccaagaagac ccgagtgaag
      481 ctgccttcag ggtccaagaa ggtcatttcc tctgctaacc gagctgttgt tggtgtcgtg
      541 gctggcgggg gcagaattga caagcctatc ttaaaggctg gccgtgccta ccataagtac
      601 aaggcaaaga ggaactgctg gccacgtgtg cagggtgttg ccatgaatcc tgtggagcat
      661 ccctttggcg gtgataacca ccaacacatt ggcaagcctt ccactatccg aagagatgcc
      721 ccagctgggc gcaaagtggg tctcattgct gcccgccgga ctggacggct acgtggaacc
      781 aaaactgtac aggagaagga gaactagagt tcaggagcta ataaagtatg tgctttggct
      841 aat
//
