LOCUS       XM_017602351            2174 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to SET domain-containing
            protein (RGD1561318), mRNA.
ACCESSION   XM_017602351
VERSION     XM_017602351.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017602351.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017602351.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2174
                     /gene="RGD1561318"
                     /note="similar to SET domain-containing protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100361623"
                     /db_xref="RGD:1561318"
     CDS             303..1388
                     /gene="RGD1561318"
                     /codon_start=1
                     /product="N-lysine methyltransferase KMT5A-like"
                     /protein_id="XP_017457840.1"
                     /db_xref="GeneID:100361623"
                     /db_xref="RGD:1561318"
                     /translation="MGKAGAVGRHLPFPGAPRRRWWPQRQRQRWWPDPGESKGKVAGR
                     AAMSLVGLWENLFAGQSKICAVMSPNKWSGIRSPLQEENSVVHHEVKFPGKPLAGILR
                     KGEEKRNARNVIRSTVKSDEQKSKGTRRGPRAPFPNQKPEAKAPPKAPPPSRDYTNVA
                     VAKQAQKKPLKGKQAPREKSQGKTQQNRKLTDFHPVRRSSRKSKAELRSEERKKIDEL
                     IESGKEEGMKVDLIDGKGRGVIATKRFSRGDFVVEYHGDLIEITDAKKREALYAQNPS
                     TGCYMYYFQYLRKTYCVDATQETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRD
                     IAAGEELLYDYGDRSKASIEAYPWLKH"
ORIGIN      
        1 atcatgagaa agtttcctta caatggcagg ttaaccaagt aacttttacc taggccttaa
       61 cattttgcct aggccattaa cattcaatct agagcttaat agattaccta ggccttaaca
      121 tataccacca ctaccccctt actgatgact tcaaagtact gctagcatgt acagtatgga
      181 gatcaaggga tgattgttga acgctactaa gtcagagcaa attatgacat ttcagaaata
      241 agaaaaaagg tccctggcct cagtcaggct gcgccccgtg ggcgccttgc ctgctgctgg
      301 ccatgggcaa agcgggcgcc gtggggcgcc atctgccctt cccgggggcg ccaaggaggc
      361 gctggtggcc gcagcggcag cggcagcgct ggtggccaga cccgggcgag agcaagggca
      421 aagtcgcagg ccgcgccgcc atgagcctag ttgggctgtg ggagaacttg tttgctgggc
      481 agtcaaagat ctgtgccgtc atgagtccaa acaaatggtc tggaattcgc tctccacttc
      541 aggaagagaa ctcggttgta catcatgagg tcaaattccc gggaaaacca ttagctggaa
      601 tcctcaggaa gggagaagaa aaaagaaacg ctaggaatgt tatccgaagc actgtgaagt
      661 cagatgaaca gaagagtaaa ggtaccagga gaggtcccag ggcgcctttc ccaaaccaaa
      721 aacctgaagc aaaagcacct ccaaaagctc cacccccatc acgtgattat accaatgtag
      781 cagttgctaa gcaagcccag aaaaagcccc tcaagggcaa gcaggcccct agggaaaagt
      841 ctcaagggaa aacacagcag aatagaaaac tcacagattt ccaccctgtg cgaaggagct
      901 ccaggaagag caaagctgag ctgcggtctg aagaaaggaa gaaaatagat gagctaattg
      961 agagtgggaa ggaagaaggt atgaaggttg atctaattga tggcaaaggc aggggcgtga
     1021 ttgctaccaa gcggttctcc cggggagact ttgtggtaga ataccatggg gacctcattg
     1081 aaatcaccga tgccaagaag cgggaggctc tatatgcaca gaacccctcc acagggtgct
     1141 acatgtacta ttttcaatat ctgagaaaaa cctactgcgt ggatgccact caggaaacga
     1201 atcgcctggg gagactgatc aatcacagta agtgtggaaa ttgccagacc aaactccatg
     1261 acattgatgg cgtgcctcac ctcatcctta ttgcctcccg agacattgcg gccggggagg
     1321 agctcctgta cgactatggt gaccgaagca aggcctccat cgaagcttac ccttggctga
     1381 agcactaacc atgtggcttc cctgcctccc tgcttccctg ccaccctgcc tccttcaaag
     1441 gacaaagtgc cctcaaaggg aaatgaagtt ttacactctc tctctctctc tctctctctc
     1501 tctctctctc tctctctctc tctctctctt agctaattac ttcaaatgtt tcttaaaagt
     1561 atattaaata ttccttttca tgtagtattt aaatgtctgt tacaggtttc cagggtgaac
     1621 ttgagcagat ggccttatat taccaaaact tttatattcc agttgttttt ggaccttttt
     1681 ggatataagc tgaacgtttg tgcttcccac gcagtgtaag atcagcacag gttttacaga
     1741 atggagttga acatgaacga ggaaaccagg ctctgcccaa gatgaaagcc aggactttcc
     1801 cgcacctcac gtccaagaac aggccggggg gtggggtgct gccaccccca cgtacagcct
     1861 ggactggatg tctccaagct cttactctcc tcaggatctt gacattgacg tgtatgaata
     1921 ttttttagca aaagtttcac agtaagctat ctacctctct gctttctcca aagcttactg
     1981 agcctggggc tcagaggccc caccaggaac acaggcttac agcttttcca ggcaccttga
     2041 agcatcaggg tgggcagtca gactagaggc cagctggaaa aagcactgtt ctcctgccca
     2101 agaagggcag gtctcctgaa actgcattaa ttctttatag aaatgtgaac actgaattta
     2161 ttttaaaaaa taat
//
