LOCUS       XM_039096503            4532 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to MAP/microtubule
            affinity-regulating kinase 4 (MAP/microtubule affinity-regulating
            kinase like 1) (RGD1561231), transcript variant X4, mRNA.
ACCESSION   XM_039096503
VERSION     XM_039096503.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4532
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4532
                     /gene="RGD1561231"
                     /note="similar to MAP/microtubule affinity-regulating
                     kinase 4 (MAP/microtubule affinity-regulating kinase like
                     1); Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 7 Proteins, and 94% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:498781"
                     /db_xref="RGD:1561231"
     CDS             945..2774
                     /gene="RGD1561231"
                     /codon_start=1
                     /product="sperm motility kinase 2B-like isoform X2"
                     /protein_id="XP_038952431.1"
                     /db_xref="GeneID:498781"
                     /db_xref="RGD:1561231"
                     /translation="MFWGLILNVCFISHYKFGSSHIKEGLIMEQDPESRDSIENFTTD
                     YKIIRTLGRGRFSVVKMAYHVPTLTCVAIKVLKNTEKCSSVMSREVGILKSLGHPHII
                     KVVEVVQTREATHLVMEHASQGDLLDRIRECGYLKSWEARRMFRQILEAVQFCHDNNI
                     VHRDIKANNILIDGRSNAKLCDFGLAAKTLPGQKLIDFCGTLPYCAPEFFEAEEYEGR
                     PFDVWSVGVLLFFMVTGHLPFLGKSFAEVRRQISSANFSIPPHVANDIFNVIVEMLMI
                     NPSRRPSIQQIMMRPMIKDSQAYSPPTSIQMFTGTPSPSTIKAMRVMRHTPEKSTESL
                     IDQNINEVLATYLIQQHKPLRKVCTHHQVESGLEDLYSFPRFLKRKGPLLSSFTLSSH
                     SSNMREKKDRKKSRKVVRRHAVGYQQTRTNTLQLDLLDYPIAEEFKDNRLQIRKTFSD
                     SKTVFSCSLTEHIQSPRLQYTYSTTADRNVSSFIPPHDFCASLQTPKGISLAGCSGDT
                     WQRETVVDENTFIKEEAMVHEDTVTSGQPQVPCPASRRGWRYHWKGFKKTISRSLRNL
                     CCCLPPPSENQVSCNNLALRKRGEHCVTHRTSPEEQQPQLHGF"
ORIGIN      
        1 actttggaca cttcaacttg ctcttcttga ctttggtttc tgtatttgct ggcttgagtt
       61 atgcatttac atttccatgt tttttattat cttctatttc acgttttatt aaattatgtt
      121 tgctatgtta gagtattcta tttttcactt ctcgtgtatg acatttttgc atccacatat
      181 gccttgagta ccatatccca gatgcattct gtggaggtca gaagagggag tcaggttttc
      241 tgggtctgga gttacaggtg gttgtgagtc tctcatacca tccctaggat tgatacaata
      301 acatattcac atagcataac tcagttgtgt aagaaaataa aatctctcta tacctgtcta
      361 tagttccact tccccgaaat ctgattccgt tgctaacctg acagctcatg ttaataaaat
      421 tatatagaaa gacttgtatc actattttta gtggtgtata ccacctgtga gtgtgctgta
      481 taggtgcgct tagagtcgag aggtgtagta accactggag ctggagttag ggtagctgtg
      541 ggcacctgtg ttctgagacc acctacaggt cctctgcctg agtagccaaa tttgggaact
      601 ctagacgcag atcgccatcc tgcacagtat gggttttcgg ggatctgttc tctttacacc
      661 ttctcttgaa gctgatattc tagatgcctc tactcaaaga gaatgctgag atcaggagag
      721 aggatggtga gcttttccaa tttagtggct tttagtatct aggattctct cagtttgcag
      781 ttggtgcctg acaactgcct ctatgtcata ttttgcatct gctcctttgc agtaggtcct
      841 tgtccttccc ttcccagtat ataaagtaca tggctagatt gtctgatgtt tttctgagct
      901 tttttttcct catatcttta atgtaggaat ttgagcgtat caacatgttc tggggcctga
      961 ttttaaatgt ctgttttatt tctcattaca agtttggttc tagccatata aaggagggcc
     1021 tgatcatgga gcaggaccca gagagccggg actccatcga gaactttacc actgactata
     1081 agatcataag aaccctggga aggggacgat tttcagtggt aaaaatggcc taccacgtcc
     1141 caaccctcac ctgtgtagct ataaaagttc tcaagaacac cgagaagtgc tcctcagtga
     1201 tgagcaggga agttggcatt ctaaagtccc tgggccatcc tcatatcatc aaggtggtcg
     1261 aagtggtcca gacaagagag gccacccacc tggtcatgga gcatgcctct cagggagacc
     1321 tactggaccg aatccgggaa tgtggatatt taaaatcgtg ggaggcccga agaatgttta
     1381 gacagatatt agaggcagta caattctgcc atgacaataa tattgtccac cgagacataa
     1441 aggccaacaa cattttgata gacggaaggt cgaatgccaa gctctgtgat tttggcctag
     1501 ctgctaaaac acttcctggg cagaagctga ttgatttctg tggcacgctg ccatactgtg
     1561 cgccagaatt ctttgaagct gaggaatatg agggccgccc atttgacgta tggagtgtag
     1621 gtgtcctcct cttcttcatg gtgactgggc acttgccttt cctaggcaag tcatttgcag
     1681 aggtgaggag acaaatcagt tcagccaatt tcagcattcc gcctcacgtt gccaacgata
     1741 ttttcaatgt tatagtggaa atgctgatga taaatcccag caggaggccc agcatccagc
     1801 aaattatgat gcgccccatg atcaaagaca gccaggccta ctcaccaccg acatccatac
     1861 agatgttcac aggaacacca agccctagca ccatcaaagc catgagagtc atgaggcata
     1921 cacctgagaa aagcactgag tctctgatag accaaaatat caacgaggtg ctggcaacat
     1981 acttgattca acagcacaag ccactcagga aagtctgcac acaccaccaa gtggagtcag
     2041 gtctagaaga tctttactcc ttccctcgtt ttcttaagag aaagggacct cttctctcct
     2101 ccttcacctt gtcctcacat tcatccaata tgagggagaa gaaggatagg aagaaatcca
     2161 ggaaggttgt cagaaggcat gctgtaggct accagcaaac aaggaccaac actctccagc
     2221 tcgacctcct ggactatcct atagctgaag aattcaagga taacaggctg caaatcagga
     2281 agacattctc agactccaag actgtgtttt cttgtagtct aactgaacat atccagtcac
     2341 ctcgacttca atacacctat tccactacag cagacaggaa tgtgtcttcc ttcataccgc
     2401 cacatgattt ctgtgcatca ctgcagacac ctaaggggat aagccttgca ggctgttctg
     2461 gagatacctg gcagagagag acagttgtgg acgaaaacac cttcatcaag gaagaggcca
     2521 tggttcatga agataccgtc actagtggcc agccacaagt gccttgccca gcttcccgtc
     2581 ggggatggcg ttaccactgg aaggggttta aaaaaacaat tagtagaagc cttcgaaacc
     2641 tgtgctgctg tctgccacca ccatcggaaa atcaagtctc ctgcaataac ttggctctca
     2701 ggaagagagg agaacattgt gtcacccaca ggaccagtcc tgaagaacag cagcctcagc
     2761 tccatggctt ttaagccagt ggtgggggtt ggcctggctg aagattatac aatctcagag
     2821 gagccaggcc agacgtccag gtgcctgtgt gcttgcaggc cccttctcca gaggaagagc
     2881 tgtccacacc acagcaaggt ctctccaggt aaaaccccag gcaggaaggc ctgccttttc
     2941 actgtgtctt gctcagaagg gagggatgaa gtagaacagt gccctaaaag tgtcagtgga
     3001 ccagtagccc tctgccctct cttctagcag aggtaaacat cagagactgt tctgtgggac
     3061 tgtactgttc tttgcttcct gtttcttgca gagaacattg gtcttcatca tgaagtagac
     3121 ttctcagaaa agtctcccta gtcagcccat cagacctgag ctaaaatggg ttcccaggtt
     3181 gaatatgagg cctgtatgtc tcctgtgaag ggaatcctcc tgtcacactt tgaccagacc
     3241 ctcacccacc cctactgccc tgtgaaagat atcacagttt atattgctta agtcctcaga
     3301 cccaactcag ggtaatgctt acaaaaccca tactgtggag tgactcccaa ggcagctgtg
     3361 ccctctctct caccagttct gccctgtaat tactcacctc tctatgtttg ctccctcaag
     3421 gccaactttc aaatgtgtaa caggattcct acctgtgtca cagcctcctc gaaggaggag
     3481 ggacaggtgt tatgagcaga gtcaaaacaa cgacttaatg atggagaagc aaactggtgt
     3541 ggccctacct catgccagct tcaggcctcc actggagtat gcattccact ggataaatct
     3601 tcccaggctg cttccattaa cctgagaatt tgcacactgc ttttttatgc ccagttaaac
     3661 agccttgcaa ttcctttgtg agagcttctg ggaagctttc cctgtccctc ctactgttac
     3721 atttgttaag atgtcatctc ctgtgttctt tttaactaga ctgtatcaac atcttccaca
     3781 gcatgaggtg tacagaatac catatgactg acatggaggg tccctctgac ccaatgtccc
     3841 tcttaatttg ttcaaaggac atcaaggatc caggcatagt aatcctgcag tgatatgtgc
     3901 tgagtttaac agcatgtccc tatagttctc caccattgtg atcacataca tatttctcat
     3961 gtgctttatc ccctgagcta caggaaattc tcttacgaca gacaatcgtt tcctgtctaa
     4021 tttgagtggg aaagcatatc atattccact ctggagcaag aagagcacta tatgaactcg
     4081 tgtatctgaa cccacaacgc acaagtttgg gaaagttcat taaaggggtt ctttgctggc
     4141 ctctagcgct gaaccaggtt agctactcag acaaaaacca aggaaaacct ctcacagaca
     4201 ctggccagcc taggttttaa gagttggcct cacaccctga tgattccttg tcatccatac
     4261 actgatatgt agaagccctg gagtctatat ctctgtcagt gtgtctgtct ttacttttac
     4321 atgaactact tccatgcagg tgggtctcaa tggatgtttc ttatactgga ctcctagaga
     4381 gccatgtacc cctcaggatg gtcttaagtg gaaaacacaa aatagaaaca tcaagtataa
     4441 aatcccaatt gatggaaata gattcacaaa attaaaaacc aacagatgaa aaacactaac
     4501 cactccaata aaaatcctta atatatcact ct
//
