LOCUS       XM_039100382            2684 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to hypothetical protein
            4932411N23 (RGD1561151), mRNA.
ACCESSION   XM_039100382
VERSION     XM_039100382.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100382.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2684
                     /gene="RGD1561151"
                     /note="similar to hypothetical protein 4932411N23; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:302774"
                     /db_xref="RGD:1561151"
     CDS             539..1996
                     /gene="RGD1561151"
                     /codon_start=1
                     /product="cyclin-D-binding Myb-like transcription factor
                     1"
                     /protein_id="XP_038956310.1"
                     /db_xref="GeneID:302774"
                     /db_xref="RGD:1561151"
                     /translation="MSTCEEVSEEVAHQVVKSVFVIEDTSRNLIPCLQNGADERENHT
                     EPLLKRPCLSPEVDSTPCISAVAFPLQEIQQSFDLVTSTVTQMAGEEVAAASMMPFQI
                     IQNVTPHEVFSLANVEQSIVSQTWFTGKEVKDALANQGHKWKQGMWTKEETNILMSNI
                     EQYMKEHGVENPAEIIFKMSKGKRKDFYRSISFGLNRPLFSIYRRVIRMYDDRNHVGK
                     YSPEEIEKLKELWQKHGNDWITIGAAMGRSPSSVKDRWRLMKDACNAGKWTEEEEQIL
                     GDAVHELTGTEVDEKVTQGVCWATVAQQVGTRSAKQCRAKWLNYLNWKQTGGIEWTRK
                     DEVTLILRLAELDVADESEIRWDELAKGWESVRSPQWLRSKWWNIKRQITNHKDFAFP
                     VLVRCLQQEYERQNASLRFWKNKSGSDMSESNPDISVQQVSFGVTSIEDNNTSICPVP
                     MTGSQITLQLLPRSLTDLPAAVGDSESVTLPTGPQ"
ORIGIN      
        1 tgtctgagta aggcctagca caagctactc tgatacttta gtctttatag atcacaggtt
       61 atttagacat ctacatctct tcattagaaa gtaacatttc tgtgacttga aagttgcagg
      121 gtattaacgt tttgagtgag aacttacctg aaaatttaca ttttagctgt tcaccttcct
      181 gggaacaggg tatcagtgat atctgagact attctgcatt gaaaggtata ttgaaataaa
      241 tcagcagttc tctgaagttt ctgtacttaa atattgcaga gacacttgaa cttgtcctat
      301 actctcagga cattaccatt gggcattgac aactagacca gaagaaaaga taaggtcaac
      361 atcactaatg ccagcaattt ttactgggat atcagactct caattctagc taaatgagtg
      421 ctcactaatg tcaaacaggc aagtgctaca aatagcacca tttttatatt atccagatta
      481 aaggaatgag gcttgattct atggaaagca gctgatctac ctgtgactag atttgaggat
      541 gagcacatgt gaagaggttt ctgaggaagt agcacatcag gttgtgaaat ctgtctttgt
      601 tattgaggac acaagcagga acctcattcc ttgccttcaa aatggggctg atgaaaggga
      661 aaatcatact gaacctctgc ttaagaggcc ttgtttgtct ccagaagttg attcaactcc
      721 ttgcatatca gctgttgcat tcccactaca ggaaatacag cagagctttg atttggtcac
      781 aagcacagtc acacaaatgg caggtgaaga ggttgctgca gcatctatga tgccattcca
      841 gattatacag aatgtcactc cacatgaagt attttcattg gctaatgtgg aacagtcaat
      901 agttagccaa acatggttca caggtaaaga agttaaggat gctctagcta accaaggaca
      961 taaatggaag caggggatgt ggactaagga agaaacaaat attttgatga gcaacattga
     1021 acagtatatg aaggaacatg gagtagagaa tcctgcagaa atcattttta agatgtcaaa
     1081 gggtaaaaga aaagatttct acaggtctat ctcatttggt ctgaatcgac ctttgttttc
     1141 aatatataga agagtaatcc gaatgtatga tgacaggaac catgtgggta agtacagccc
     1201 tgaggaaata gagaagctta aggagctctg gcagaagcat ggcaatgact ggataacaat
     1261 aggggccgcc atgggaagaa gtccgtcttc tgtcaaagat cggtggcgac taatgaagga
     1321 tgcttgcaac gcggggaaat ggaccgaaga agaagaacag attcttggag atgcggttca
     1381 tgagttgaca ggcacggagg tggatgagaa agtcactcag ggtgtgtgtt gggcaacagt
     1441 ggctcaacaa gtgggtactc gctcagcaaa gcagtgtcgt gctaaatggc tcaattatct
     1501 gaactggaaa cagactggag gtattgaatg gacaaggaaa gatgaagtca ctctcatcct
     1561 caggctagca gagcttgatg tagctgatga aagtgaaatt cgctgggatg aattagctaa
     1621 aggatgggag agtgttcgtt caccacaatg gctgcgaagt aaatggtgga acatcaaaag
     1681 acaaattaca aatcacaagg attttgcatt ccccgtccta gtaagatgtc ttcaacaaga
     1741 atatgaaaga caaaacgcaa gcctcagatt ttggaagaat aaatctggat ctgacatgtc
     1801 agagagcaac cctgatatca gtgttcaaca agtctccttt ggagtcacaa gtatagaaga
     1861 taataacaca tctatctgtc cagtccccat gacaggatcg caaattacac tccaactcct
     1921 tcccaggtcc ttaacagact tacctgctgc tgttggtgac tctgaatctg taaccctgcc
     1981 cactggacca cagtagatat ttgagattct cccctatttc catttttgtt ccctcacctt
     2041 gcacctattg tcttcaaaca agttcaactc attgtcttct attaactctg accacttgta
     2101 ccacagtaaa cataacagct gctgcacctg catctcctaa ctgatcacat ttcacccttt
     2161 atccctcaag catcctgtgg agtattccag tcaaatttac ctgaaatgtc atatacaaag
     2221 aatcatctgt tgctgaaaag tgacattgct ttttccacat cccaagcaga attttcagtc
     2281 catagtatca cctacatttt tttctgattt tcatggacta ctgctcattc aaagcaaaag
     2341 ataaatcact gaaagaatta tttaactata tggctctgtt gccataattt gatgatgctc
     2401 ttatttataa attcagaggc ccaaacagca tagaattaat gaactgtgct aagagttcaa
     2461 cagaagaatt ccccaacacc aaccaatata ataaattcac tcagatttat tgggtgcttg
     2521 tgtttctgag gagttagtca ctcagcatag tagagcaagt gcattaaaca agtgatacca
     2581 aaaccatggt ttgtgctcct tcacttcatg gcttgatcaa ggcaggggat tttacatgta
     2641 ctaaatcagt tttgcctgtc agagcactat gtctcataat aaaa
//
