LOCUS       XM_039106339             840 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S3
            (RGD1560831), mRNA.
ACCESSION   XM_039106339
VERSION     XM_039106339.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106339.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..840
                     /gene="RGD1560831"
                     /note="similar to 40S ribosomal protein S3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 43 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:499803"
                     /db_xref="RGD:1560831"
     CDS             29..760
                     /gene="RGD1560831"
                     /codon_start=1
                     /product="40S ribosomal protein S3-like"
                     /protein_id="XP_038962267.1"
                     /db_xref="GeneID:499803"
                     /db_xref="RGD:1560831"
                     /translation="MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSRVEVRVTPT
                     RTEIIILGTRTQNVLGEKGRRIRELTAVVQKQFVFPEGSVELYAEKVATGGLCAIAQA
                     ESLCYKLLGGLAVRRACYGVLRFIMESGAEGCEVVVSGKLRGQRAKSVKFVDGLMIHS
                     GDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL
                     PTTPISEQKGGKPEPHAMPQPVPTA"
ORIGIN      
        1 tttcctttca gcggcgcgcg gcagcaagat ggcggtacag atttccaaga agaggaagtt
       61 tgtagctgat ggcatcttta aagctgaatt gaatgagttt ctcactcggg agctggctga
      121 agatggctac tctagagttg aagttcgagt tacgccgacc agaacagaaa tcattatttt
      181 aggcaccaga acacagaatg ttcttgggga gaagggtcgt cggatcagag agctgactgc
      241 agttgtccag aaacagtttg tcttccctga aggcagcgta gagctgtatg cagaaaaagt
      301 ggccacagga ggtctgtgtg ccattgccca ggcagagtct ctatgctaca aactcttagg
      361 agggcttgca gttcgaaggg cctgctatgg tgtgcttcgg ttcattatgg aaagcggggc
      421 tgagggctgc gaggttgtgg tgtctgggaa gctccgagga cagagggcca agtccgtgaa
      481 gtttgtggat ggtctgatga ttcacagcgg agaccctgtt aactactatg ttgatactgc
      541 tgtgcgccat gtgctcctca gacagggcgt gctgggcatc aaagtgaaga tcatgctgcc
      601 ctgggaccca agcggtaaga ttggtcccaa gaaacctctg cctgatcatg tgagcattgt
      661 ggaacctaaa gatgaaatct tgcccaccac ccccatctca gaacagaagg gtgggaagcc
      721 agagccacac gccatgcctc agccagtgcc tacagcataa cagggtctta gcagctgcat
      781 ctggaggctg gatgttgtct tgtaagtacg tttaataaaa tcttgaacaa aggaaaaaaa
//
