LOCUS       XM_039100356             682 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to small nuclear
            ribonucleoparticle-associated protein (RGD1560821), mRNA.
ACCESSION   XM_039100356
VERSION     XM_039100356.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100356.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..682
                     /gene="RGD1560821"
                     /note="similar to small nuclear
                     ribonucleoparticle-associated protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:367865"
                     /db_xref="RGD:1560821"
     CDS             22..606
                     /gene="RGD1560821"
                     /codon_start=1
                     /product="60S ribosomal protein L24-like"
                     /protein_id="XP_038956284.1"
                     /db_xref="GeneID:367865"
                     /db_xref="RGD:1560821"
                     /translation="MKVELCSFSGYKIYPGHGRHYARTDRKVFQFLSFFLSFFFFFWF
                     FFSELGTESRALHFLGKCSTVFQFLNDKCESAFLSKRNPQQINWTVLYRRKHKKGQLE
                     EIQKKRTSRAVKFQRAITGASVADIMAKKNQKPEVRKAQRKQAIRAAKEAKKAKQAWK
                     KTAMAAAKAPTKADPKQKILKPMKVSAPRVGGKR"
ORIGIN      
        1 ggcaggccga catctgtcac catgaaggtc gagctgtgca gttttagtgg gtacaagatc
       61 tacccgggac acgggcggca ctacgccagg actgacagga aggttttcca gtttctttct
      121 ttctttcttt cttttttttt ttttttttgg ttcttttttt cggagctagg gaccgaatcc
      181 agggccttgc acttcctagg taagtgctct accgttttcc agtttcttaa tgacaaatgt
      241 gagtccgcat tcctttccaa aaggaaccct cagcaaatta actggactgt cctctacaga
      301 agaaaacaca agaaaggtca gttggaagaa attcaaaaga aaagaaccag ccgtgcagtc
      361 aagttccagc gggctatcac gggcgcttct gtggctgata taatggccaa gaagaatcag
      421 aaaccagaag ttaggaaagc tcagcgaaag caggctatca gggctgccaa ggaagcaaaa
      481 aaggctaagc aggcatggaa gaaaacagca atggctgctg ccaaggcccc cacaaaggca
      541 gaccctaaac aaaagatcct gaagcctatg aaggtctctg ctcccagagt tggtgggaaa
      601 cgttaatttg gtagatgaga gtttaaaaat aaagatttat ctttaactct aaaaaaataa
      661 aaataaaata aaagaattca ag
//
