LOCUS       NM_001384247            1731 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus similar to RIKEN cDNA 4930579C12 gene
            (RGD1560775), mRNA.
ACCESSION   NM_001384247
VERSION     NM_001384247.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC128758.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-83                JAXUCZ010000008.1  98562214-98562296   c
            84-151              JAXUCZ010000008.1  98559983-98560050   c
            152-176             JAXUCZ010000008.1  98559112-98559136   c
            177-251             JAXUCZ010000008.1  98546859-98546933   c
            252-326             JAXUCZ010000008.1  98542082-98542156   c
            327-397             JAXUCZ010000008.1  98537558-98537628   c
            398-422             JAXUCZ010000008.1  98536706-98536730   c
            423-536             JAXUCZ010000008.1  98535132-98535245   c
            537-607             JAXUCZ010000008.1  98532689-98532759   c
            608-632             JAXUCZ010000008.1  98532105-98532129   c
            633-746             JAXUCZ010000008.1  98530367-98530480   c
            747-784             JAXUCZ010000008.1  98514353-98514390   c
            785-809             JAXUCZ010000008.1  98513627-98513651   c
            810-923             JAXUCZ010000008.1  98510139-98510252   c
            924-994             JAXUCZ010000008.1  98509749-98509819   c
            995-1019            JAXUCZ010000008.1  98508981-98509005   c
            1020-1130           JAXUCZ010000008.1  98505349-98505459   c
            1131-1189           JAXUCZ010000008.1  98502989-98503047   c
            1190-1214           JAXUCZ010000008.1  98502198-98502222   c
            1215-1282           JAXUCZ010000008.1  98489001-98489068   c
            1283-1307           JAXUCZ010000008.1  98488525-98488549   c
            1308-1348           JAXUCZ010000008.1  98487778-98487818   c
            1349-1373           JAXUCZ010000008.1  98487342-98487366   c
            1374-1445           JAXUCZ010000008.1  98487053-98487124   c
            1446-1502           JAXUCZ010000008.1  98486139-98486195   c
            1503-1627           JAXUCZ010000008.1  98484650-98484774   c
            1628-1731           JAXUCZ010000008.1  98483284-98483387   c
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q31"
     gene            1..1731
                     /gene="RGD1560775"
                     /note="similar to RIKEN cDNA 4930579C12 gene"
                     /db_xref="GeneID:501031"
                     /db_xref="RGD:1560775"
     exon            1..83
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..1606
                     /gene="RGD1560775"
                     /codon_start=1
                     /product="uncharacterized protein LOC501031"
                     /protein_id="NP_001371176.1"
                     /db_xref="GeneID:501031"
                     /db_xref="RGD:1560775"
                     /translation="MGNCCCNTQVAPEHTTVLPSSTEGKYSKSSVKVDHRRVQKIRRE
                     SGIVGSSVSSALSHQPLQAGTVARESGKVRSSLSSALSCQPLQAGTVLPIRADSASSD
                     EDQEKSPLRLVKVSSKKSKHGSNILRTMQRKGTIFLIDPEVCQFIDEIRKDKMKNEME
                     VVPLRIDTTTLPHNEEKAPVKPVEVSSKKRRCVSAILKKISRKRAVVPTDIERPQVLP
                     GTSRETSHILTEAGGQGEPPVGTEKVETKKQKHIFSMFKGICRKSTVTPQDTKIRSVS
                     LAPSTKTREVKTQDKAENTDNTIVPDDQKQTSGTVVSVETRRTRRISDLLKSIEEKQA
                     LAPQDFMGPEVCGYPPSTVKDNRKEEEAGPSQVAQQKPPETLERVESKGFKFRLQIDT
                     EINQIFYREEEFVPHDEGSWEEYESYFPEGIRVAESRHTMASTVVGSYIAEVGDTDVE
                     QQQKAINSKEKFPDAIEVQQWELKKLSSTVAPVVNLLYLAPPTSSSSDEGYVPRKRKK
                     KKRKRRYY"
     exon            84..151
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            152..176
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            177..251
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            252..326
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            327..397
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            398..422
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            423..536
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            537..607
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            608..632
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            633..746
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            747..784
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            785..809
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            810..923
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            924..994
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            995..1019
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1020..1130
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1131..1189
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1190..1214
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1215..1282
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1283..1307
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1308..1348
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1349..1373
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1374..1445
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1446..1502
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1503..1627
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
     exon            1628..1731
                     /gene="RGD1560775"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccgagtaca tgactagatt ttacagagtg atagtaacgt tgaaattgtt agattatggg
       61 taattgttgt tgtaatacac aagttgcacc tgaacataca actgtcctac cttccagtac
      121 cgaaggaaaa tattccaagt cctcagtgaa ggtggatcat agaagagtcc aaaagataag
      181 aagagagagt ggaatagtgg ggtcatccgt gtcctcagca ctatcacatc aaccgctgca
      241 ggcaggcaca gtagcaagag agagtggaaa agtgaggtca tccttgtcct cggcactatc
      301 atgtcaaccc ctgcaggcag gaacagtgtt acctatccgt gcagacagtg caagttcaga
      361 cgaggaccag gaaaaatcac cactaaggct agttaaggta tcatctaaga aaagcaaaca
      421 tgggtccaac attttaagaa ctatgcagcg gaaggggacc attttcctta ttgatcctga
      481 agtgtgtcaa tttatagatg aaattcgcaa agacaaaatg aaaaatgaaa tggaagtggt
      541 acctttacgt atagacacta caactttgcc acacaatgag gaaaaagcac cggtgaagcc
      601 agtagaggtg tcatctaaaa aacgcagatg tgtttctgct atcttgaaga aaatttctcg
      661 aaagagagct gtcgtcccca cagacatcga aaggcctcaa gtccttcctg gcacttcaag
      721 agaaacgtct cacattctaa cagaagcagg gggacaagga gagccaccag tggggactga
      781 gaaggtggag acgaaaaaac aaaaacacat tttttcgatg ttcaagggga tttgtagaaa
      841 atcaactgta acccctcaag atactaaaat acgttcagtc tccttggccc cttctacaaa
      901 gacaagagaa gtgaaaacac aagacaaagc agagaatacc gacaacacaa ttgtacctga
      961 tgaccaaaaa cagacatcag ggactgtggt atcggtggag acaagaagaa ccagacgtat
     1021 ttctgattta ttaaaaagta ttgaagagaa acaggccttg gcccctcagg atttcatggg
     1081 cccagaagtt tgcggttatc ctccatcaac tgtaaaggat aataggaaag aggaagaagc
     1141 tggaccgtcc caggttgccc aacaaaagcc accggagacc ctggagaggg tggagtcgaa
     1201 aggattcaaa ttccgtctac aaattgacac agaaattaat cagatatttt acagagagga
     1261 agagttcgtg cctcatgatg aggggtcatg ggaagaatat gaaagctact tccctgaggg
     1321 catcagagtg gcggaatccc gacacactat ggcctctact gtagtaggga gttacatagc
     1381 cgaggtggga gacaccgatg ttgaacaaca gcagaaagct atcaatagta aagagaaatt
     1441 tccagatgcc attgaagttc agcaatggga actaaaaaaa ttgtcaagta ctgttgctcc
     1501 agtggtcaac ttattatatc tagcgccacc tacatcttcc tcttctgatg aaggatatgt
     1561 ccccaggaaa cggaagaaaa agaaaagaaa aaggcgctat tactaaaagc cagccatttt
     1621 gcctccagcc ctggtatgaa tttgggggcc tcaatggctg gaggcaaaga ggcattggcc
     1681 aatggccaaa atgcctatat aatccacacc cttaataaaa atctccttgc a
//
