LOCUS       XM_039111560             763 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S24
            (RGD1560729), mRNA.
ACCESSION   XM_039111560
VERSION     XM_039111560.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111560.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..763
                     /gene="RGD1560729"
                     /note="similar to ribosomal protein S24; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, 19 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:366411"
                     /db_xref="RGD:1560729"
     CDS             248..604
                     /gene="RGD1560729"
                     /codon_start=1
                     /product="40S ribosomal protein S24-like"
                     /protein_id="XP_038967488.1"
                     /db_xref="GeneID:366411"
                     /db_xref="RGD:1560729"
                     /translation="MFLLYSSSTVAIMNDTVTIQTRKFMTNCLLQRKQMVIDVLHPGK
                     ATVPKTEIREKLAKMYKTTPDVIFVFGLRTHFGGGKTTGFGMIYDSLDYAKKNEPQHR
                     LARHGLYEKKKTSRKQ"
ORIGIN      
        1 attatatatg tatcagtcta aaataacttt ctcaggtcaa caacggtata aagctactct
       61 caccacttgc tactctatcc tccctctaag ccatggacgg tctcataata tctactaaat
      121 attcaaaagc agattaagaa aaataatatg tcacagaacc accaaaaata tactataatt
      181 ctaaagattt atgcatcaag gcaaagacac ctaatttaat taaaaaatta ctacatataa
      241 aaatcacatg ttcctcctct acagctccag cacagtagcc atcatgaatg acacagtaac
      301 catccagacc aggaagttca tgacaaactg tctgcttcag aggaaacaga tggtcattga
      361 tgtccttcat cctgggaagg ccacagtacc aaagacagaa attcgggaaa aactggccaa
      421 gatgtacaaa accacaccag atgtcatctt tgtatttgga ttgagaaccc actttggtgg
      481 tggcaagaca actggctttg gcatgatcta tgattcttta gattatgcaa agaagaatga
      541 gcctcaacac agacttgcaa gacatggcct ttatgagaag aaaaagacat cccgcaaaca
      601 gtgaaaggaa cacaagaact gaatgaagaa ggtcagggga actgcaaagg ccaatgctgg
      661 tgctggcaaa aagtgagtgg agactggata cagccaaagg agcagctctg cggtgacttg
      721 atgttctgct gtgatatgca aatgtctgag ggtaaaataa act
//
