LOCUS       XM_039103914             492 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to coated vesicle membrane
            protein (RGD1560703), mRNA.
ACCESSION   XM_039103914
VERSION     XM_039103914.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..492
                     /gene="RGD1560703"
                     /note="similar to coated vesicle membrane protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins, and 80% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:502535"
                     /db_xref="RGD:1560703"
     CDS             1..492
                     /gene="RGD1560703"
                     /codon_start=1
                     /product="transmembrane emp24 domain-containing protein
                     2-like"
                     /protein_id="XP_038959842.1"
                     /db_xref="GeneID:502535"
                     /db_xref="RGD:1560703"
                     /translation="MVTLAELLVLLAALLATASGYFVSIDAHTKECFFKRVTSGTKMG
                     LIFEVAEVAEGGFLDIDVEITGPDNKGIYRGDRESRGKYTFAAHMDGTYKFCFSNRMS
                     TLTTKIVMFTIDIGEAPKGQDMEKEAHQNKLEEMINELAVQSVYACECMDRRGSLEAI
                     LIV"
ORIGIN      
        1 atggtgacgc tggcagaact gctggtgctg ctggcagcgc tgctggccac ggcctcgggc
       61 tacttcgtca gcatcgacgc gcacacgaag gagtgcttct tcaagcgggt cacctcgggc
      121 accaagatgg gcctcatctt cgaggtggcg gaggtggcgg agggtggttt cctggacatc
      181 gacgtggaga tcacaggacc agataataaa ggaatctata gaggagaccg ggagtccaga
      241 gggaagtaca cgtttgcagc ccacatggat gggacataca agttctgctt tagtaatagg
      301 atgtccactc tgactacaaa gatagtgatg ttcaccattg acattgggga ggctcctaaa
      361 ggacaagaca tggagaaaga agctcatcag aacaagctag aagaaatgat taatgagctg
      421 gcagtgcaat ctgtctatgc atgtgaatgc atggaccgcc ggggctcact ggaagctatt
      481 ctgatagtgt aa
//
