LOCUS       XM_039080328            1177 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical gene supported by
            NM_053561; AF062594 (RGD1560617), mRNA.
ACCESSION   XM_039080328
VERSION     XM_039080328.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080328.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1177
                     /gene="RGD1560617"
                     /note="hypothetical gene supported by NM_053561; AF062594;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 25 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:300135"
                     /db_xref="RGD:1560617"
     CDS             23..1177
                     /gene="RGD1560617"
                     /codon_start=1
                     /product="nucleosome assembly protein 1-like 1"
                     /protein_id="XP_038936256.1"
                     /db_xref="GeneID:300135"
                     /db_xref="RGD:1560617"
                     /translation="MADIDNKKESELDQDLEDVEKVEEEETGEETKVKARQLTVQMMQ
                     NPQILAALQARLGSRVDTPTGYTESLPKVVKRRVNALKNLLVKCAQIEAKFDEDVHDL
                     ERKYAVLCQPLFDKRFEIINAIYEPTEEECEWKPDEEDEVSEELKEKAMIEDEKKDEE
                     KEDPKGIPEFWLTDFKNVDLLSDMVQEHDEPILKPLKDTKVKFSDPGQPISFILEFHF
                     EPNEYFTNEMLTKTYRMRSEPDDSDPLSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
                     QKHKGHGGTVRTVTKTVSNDSFFNFFAPPEIPENGDLDDDAEAILAADFEIGHFLCEH
                     IIPRSVLFFTGEDIEDDGDDYDEEGEDADEGYQLFEQVKSCSKLFQCWLQ"
ORIGIN      
        1 cgatatttgg agttcttaca agatggcaga cattgataac aaaaaagagt ctgaacttga
       61 tcaagatttg gaagatgttg aaaaagtaga agaagaagaa acgggtgaag aaacaaaagt
      121 gaaagcacgt cagctaactg ttcagatgat gcaaaatcct cagattcttg cagctcttca
      181 ggcaagactt ggtagtcggg tagacacacc aacaggatac actgaaagct tgcctaaggt
      241 agtcaaaaga cgagtgaatg ctctcaagaa tcttctagtt aaatgtgcac agatagaagc
      301 caaattcgat gaggatgttc atgatcttga gagaaaatat gctgttctct gtcagcctct
      361 atttgataag cgatttgaga tcattaatgc aatttatgaa cctacagaag aagaatgtga
      421 atggaaacca gatgaggaag atgaagtttc ggaggagctg aaagaaaagg ccatgattga
      481 agatgagaaa aaggatgaag aaaaagaaga ccctaaagga attcctgagt tttggttgac
      541 agattttaag aatgttgatt tgctcagtga tatggttcag gaacatgatg aacctattct
      601 gaagcccttg aaagatacta aagtgaagtt ttcagaccct ggccagccta taagtttcat
      661 cttagaattt cactttgagc ccaatgaata tttcacaaat gaaatgttaa caaagactta
      721 caggatgagg tcagaaccag atgattctga tcccctttct tttgatggac cagaaattat
      781 gggttgtaca gggtgccaga tagactggaa aaaaggaaag aatgttactt tgaaaaccat
      841 taagaagaag cagaaacaca agggacatgg tgggacagtt cgtactgtga ctaaaacagt
      901 ttccaatgat tctttcttta atttttttgc tcctcctgaa attcctgaga atggagatct
      961 ggatgacgat gctgaggcaa tactggctgc agactttgaa attggtcact ttttatgtga
     1021 gcatataatc ccaagatcag tgttattctt cactggagaa gatattgagg acgatggcga
     1081 tgactacgac gaagaaggtg aagatgctga tgagggttat cagctcttcg aacaagtcaa
     1141 aagctgcagt aaactttttc aatgttggct gcagtaa
//
