LOCUS       XM_006257604             704 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 1700001F22
            (RGD1560585), mRNA.
ACCESSION   XM_006257604
VERSION     XM_006257604.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006257604.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006257604.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..704
                     /gene="RGD1560585"
                     /note="similar to RIKEN cDNA 1700001F22; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:317597"
                     /db_xref="RGD:1560585"
     CDS             143..649
                     /gene="RGD1560585"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_006257666.1"
                     /db_xref="GeneID:317597"
                     /db_xref="RGD:1560585"
                     /translation="MGKDSKRRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRK
                     CSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYTGPRRERRRRDPDAPRKPPSSFLL
                     FSQDHFEEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY
                     YHQCQRGE"
ORIGIN      
        1 ctgggccctg gctaaggcac acacagaggg aagatttcac cccatggagg acactgtcta
       61 ggctgctcct gacgtgaaga gacaaaaatc attgctatcc caatcagcac gatccagcaa
      121 cacaattcat gcttttataa acatgggaaa agacagcaaa cgaagaccga aggtgaacgt
      181 ctctccttat gtccatttta tgatggattt cagaaatcaa acgagggagc aacagccaaa
      241 cacctattat gattttaccg aattttctag aaagtgttct gaaaaatgga agaccatctc
      301 aaagaaggaa aaaaagaagt atgaagccct ggccaagcgc gacaaagatc ggtaccaacg
      361 tgaaatgaga aactataccg gaccgagaag ggagagaaga aggagagatc cagatgcacc
      421 gcggaagcca ccatcctcgt tcctgctctt ctcccaggac cattttgagg agataaaaga
      481 acaacatcca aactggactg tggcgcaggt ggccaaggct gcagggagga tgtgggccag
      541 gtgttcagaa gcggataaaa tcccctacga ggagagggct gcggttctga gggccaagta
      601 ccttgaagag cgggaggcct actaccacca atgccagcgc ggggagtaaa acttcaaggg
      661 atggggcaaa cccagtctga aacaataaac ctcattcaac tggc
//
