LOCUS       XM_039080627             800 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to basic transcription factor
            3 (RGD1560568), mRNA.
ACCESSION   XM_039080627
VERSION     XM_039080627.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080627.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..800
                     /gene="RGD1560568"
                     /note="similar to basic transcription factor 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:500914"
                     /db_xref="RGD:1560568"
     CDS             40..528
                     /gene="RGD1560568"
                     /codon_start=1
                     /product="transcription factor BTF3-like"
                     /protein_id="XP_038936555.1"
                     /db_xref="GeneID:500914"
                     /db_xref="RGD:1560568"
                     /translation="MKETIMNQEKLTKLQAQVRIGGKGTARRKKKVVHRTATADDKKL
                     QFSLKKLGVNSISGIEEVNMFTNQGTVIHFNNPKVQGSSAANTFTITGHAETKQLTEM
                     LPSILNQLGADSLTSLRRPVEALPKQSADGKAPLATGEEEEDEVPDLVENFDEASKNE
                     AN"
ORIGIN      
        1 ccttagtccc cctcgcggtc ccatttccac tccgacaaga tgaaagaaac gatcatgaac
       61 caggaaaaac tcaccaaact gcaggcacaa gtgcgcattg gtgggaaagg aactgctcgt
      121 agaaagaaga aggtggttca cagaacagcc acagcagacg ataaaaaact gcagttctcc
      181 ttaaagaagt taggggtaaa cagtatctct ggtattgaag aggtgaacat gtttacaaac
      241 caaggaacag tgatccattt taacaaccct aaagttcagg ggtcttcggc agcaaacacc
      301 ttcaccatta caggccacgc cgagacaaag cagctgacag aaatgcttcc cagcatcctc
      361 aaccagcttg gtgcagacag tctgaccagt ttgaggagac cggtggaagc tctgcccaag
      421 caatctgcgg atggaaaagc accacttgct actggagagg aggaggagga tgaagttcca
      481 gatctggtgg agaattttga tgaagcttct aagaacgagg caaactgaat cgaagcgact
      541 tctgaagaag gtgacacttg gcagaagtta caataggagc tgctgtttta tatcatgact
      601 gctttttaaa cattttttgt ttattatgga tctgataaaa tctagatctc taatattttt
      661 aagcccaaac cccctggaca ctgcagctct tttcagtttc gctcaagcct aattcattct
      721 ttgcagcaaa ttaagctgaa gacgcctggg aataaagttt ggaaaaggtt aataaaattc
      781 tttgcctagt aaaaaaaaaa
//
