LOCUS       XM_039103337             502 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus similar to Farnesyl pyrophosphate
            synthetase (FPP synthetase) (RGD1560208), mRNA.
ACCESSION   XM_039103337
VERSION     XM_039103337.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086020) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..502
                     /gene="RGD1560208"
                     /note="similar to Farnesyl pyrophosphate synthetase (FPP
                     synthetase); Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:295189"
                     /db_xref="RGD:1560208"
     CDS             20..502
                     /gene="RGD1560208"
                     /codon_start=1
                     /product="farnesyl pyrophosphate synthase-like"
                     /protein_id="XP_038959265.1"
                     /db_xref="GeneID:295189"
                     /db_xref="RGD:1560208"
                     /translation="MFKIESCTAFYSFYLPIAAAMYMAGFDREKEHANALKILLEMGK
                     FFQIQDDYLDLFGDPSVTGKVDTDIQDNKCSWPVVQCLLRATSQQHQKVEENYGQKDP
                     EKVAQVKALYEALDLQNVFFKYEEDSYNHLKSLIEQCSVPLSPSIFLELAKKIYKWRK
                     "
ORIGIN      
        1 ggccactcta gcatttatca tgtttaagat agagtcctgt acagctttct actctttcta
       61 cctccctatc gcagctgcca tgtacatggc tggattcgat agggagaagg aacatgctaa
      121 tgctctaaag atcctgctgg agatgggcaa gttcttccag atccaggatg actaccttga
      181 tctctttgga gaccccagtg tgacgggaaa ggtcgacact gacatccagg acaacaaatg
      241 cagctggccg gtggttcagt gtctcctacg agccacttct cagcaacacc agaaagtaga
      301 ggagaattat gggcagaagg acccagaaaa agtggcgcag gtgaaagcac tgtatgaggc
      361 gctggatctg cagaatgtgt tcttcaagta cgaggaagac agttacaacc acctcaagag
      421 tctcatagag cagtgctctg tgcccctgtc cccatccatc ttcctagaac tagcaaagaa
      481 gatctacaag tggagaaagt ga
//
