LOCUS       XM_578020               1206 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to hypothetical protein
            C130079G13 (RGD1560162), transcript variant X1, mRNA.
ACCESSION   XM_578020
VERSION     XM_578020.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_578020.8.
            
            On Jan 21, 2021 this sequence version replaced XM_578020.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1206
                     /gene="RGD1560162"
                     /note="similar to hypothetical protein C130079G13; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins, and 38% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:502534"
                     /db_xref="RGD:1560162"
     CDS             1..1206
                     /gene="RGD1560162"
                     /codon_start=1
                     /product="arylacetamide deacetylase-like 2 isoform X1"
                     /protein_id="XP_578020.5"
                     /db_xref="GeneID:502534"
                     /db_xref="RGD:1560162"
                     /translation="MGFQALCVGLLCVSFLSYIYTPMPDNIEETWKVMALDAVAKTCN
                     LVATLCDNIGLMKYEDVLAILASAHFTKPVSDENVTVIDTDFCDIPVRLYLPKRKSER
                     RRPAVIFIHGGAFVLGSYKIAAYDDLNRLTANKLDAVVVGIDYRLAPKYPFPAALEDC
                     VYVIKFFLQEKVLAKYRVDPSRICIMGDSSGGTLAATVTQLLQNDPNFKGRIKAQALM
                     YPGLQSLDTFLPSHQEYQHGPVLTREMIIKLLCLYVTEDQVLPQAALRNEHMPEESRH
                     LFKFVNWSDFLPEKYKKNHVYTEPVLGKLNASYPVLVDSRLSPLLVNDSQLQSLPLTY
                     IVTCEHDIFRDDGLIYISRLRNVGVQVTHEHIEKGVHGALSFTSAPVFLNLGLKLRDK
                     YINWLEENL"
ORIGIN      
        1 atgggattcc aagctctctg tgtggggctg ctttgtgtta gctttttatc ttatatttat
       61 acacccatgc ctgacaacat tgaagaaacc tggaaagtaa tggccctgga tgcagttgct
      121 aaaacttgta accttgtggc cacattatgt gataacatag gtcttatgaa atatgaagat
      181 gtattagcaa ttttagcatc agcacacttt acaaaaccag tttcagatga aaacgttaca
      241 gtgattgaca cagacttttg tgacatccct gttcgtctgt acttaccaaa gaggaagtct
      301 gaaagacgga gaccagctgt gattttcatt catggtggtg cctttgtctt gggaagttat
      361 aagatagcag cctatgatga tctgaacaga ttgactgcaa acaagctcga cgctgttgtt
      421 gtgggaatag actacagact tgctcccaag tatcctttcc cagctgccct tgaagactgt
      481 gtttatgtga tcaagttctt tctccaggag aaagttcttg caaaatacag agtggatccc
      541 tcacgcatct gcattatggg agacagctct gggggtacct tggcagcaac agtgactcaa
      601 ctgctacaga atgatccaaa tttcaaaggt agaattaaag cacaagcctt gatgtatcca
      661 ggcctacagt cacttgatac ttttctacca tcccatcaag agtatcaaca tggtccagtt
      721 ctgaccaggg agatgataat taagttgctt tgcctatatg tgactgaaga ccaagttcta
      781 ccccaggctg cactgaggaa cgagcacatg cctgaagaat cgagacacct attcaagttt
      841 gttaactgga gtgacttcct tcctgagaag tataaaaaga accatgttta cactgaacca
      901 gttcttggaa aattgaatgc ttcctatcca gtacttgtgg acagcaggtt gtcgcctttg
      961 ctagtcaatg actcacagtt acagagtttg ccattgacat acattgtcac ctgtgaacat
     1021 gatatcttta gagatgacgg tctcatttac atctcacggc ttagaaatgt tggggttcaa
     1081 gttactcatg agcatataga gaaaggagta catggagccc tatcattcac cagcgctcca
     1141 gtgtttttaa atttaggatt aaaattaaga gataagtata ttaattggtt agaagaaaat
     1201 ctataa
//
