LOCUS       XM_039100209             735 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein L10a
            (RGD1560124), mRNA.
ACCESSION   XM_039100209
VERSION     XM_039100209.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100209.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..735
                     /gene="RGD1560124"
                     /note="similar to ribosomal protein L10a; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 1 long SRA read, 42 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:302497"
                     /db_xref="RGD:1560124"
     CDS             40..693
                     /gene="RGD1560124"
                     /codon_start=1
                     /product="60S ribosomal protein L10a-like"
                     /protein_id="XP_038956137.1"
                     /db_xref="GeneID:302497"
                     /db_xref="RGD:1560124"
                     /translation="MSSKVSRDTLYEAVWEVLHGNQRKRRKFLETVELQISLKNYDPQ
                     KEKHFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPDMDIEALKKLNKNKKLVKK
                     LAKKYDAFLASESLIKQIPRILGPRLNKAGKFPSLLTHNENMGAKVDEVKSTIKFQMK
                     KVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY"
ORIGIN      
        1 actcaaatag cttcttttcc ggttcccgca gccgcagcca tgagcagcaa agtttcacga
       61 gacaccctct acgaggcggt gtgggaagtc ctacacggga accagcgtaa gcgccgcaag
      121 tttctggaga cggtggagct gcagatcagc ctgaagaact acgaccctca gaaggaaaaa
      181 cacttctcgg gcaccgtcag gcttaagtcc acccctcgcc ccaagttctc cgtgtgcgtc
      241 ctgggagacc agcagcactg tgatgaagcc aaggccgttg atatccccga catggacatc
      301 gaggcgctca agaagcttaa caagaacaag aagttggtca aaaagctggc caagaagtat
      361 gatgcctttt tggcctccga gtctctgatc aagcaaatcc cacgtatcct gggcccacgc
      421 ctaaacaagg cgggcaagtt cccctccctg ctgacacata atgaaaacat gggggccaaa
      481 gtggatgagg tgaaatccac aatcaagttc cagatgaaga aggtgctgtg tctggccgtt
      541 gccgtcggcc acgtgaagat gaccgatgat gagctagtct acaacatcca cctggctgtc
      601 aacttcttgg tgtccttact caagaaaaac tggcagaacg tccgggctct gtacatcaag
      661 agcaccatgg gcaagcccca gcgtctgtat taggacgctc caataaacct cgttgctgcc
      721 ttcaaaaaaa aaaaa
//
