LOCUS       XM_039094082            1259 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein L27
            (RGD1560069), partial mRNA.
ACCESSION   XM_039094082
VERSION     XM_039094082.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..>1259
                     /gene="RGD1560069"
                     /note="similar to ribosomal protein L27; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:364450"
                     /db_xref="RGD:1560069"
     CDS             810..>1259
                     /gene="RGD1560069"
                     /codon_start=1
                     /product="60S ribosomal protein L27-like"
                     /protein_id="XP_038950010.1"
                     /db_xref="GeneID:364450"
                     /db_xref="RGD:1560069"
                     /translation="MGKFKRPRKVVLVLAGQYSGCKAVILKIIDDGTSDRPYSHALVA
                     GIDRYSRKVASAMGKKKIAKRSKIKSFGKIYNYNFLMPTRYPMDIPLHKTVVNKDVCR
                     DPALKYMARQEAEVKSEERHIGYGREEQMFFSRSFTFRYIFISIIKNK"
ORIGIN      
        1 ctatctatct atctacctac ctacctacct accgcccact tatcttaatc tattaatctt
       61 ataattattc cattttacca cctctcaata agtcaaagaa aagattcttc ctctctatag
      121 ttggtatgga ttttagaatc agacggtaaa gaaagaaaaa agttattgta ttgtcttacc
      181 aatcacagta ctaaatttca caaattaaat gcatgtactc accagaaaat agagttgata
      241 taggtgggac ggtttaaatc ctagagttgt agagtcttag aaactgagat cgctcaaatc
      301 tttctagaac caaattccag atatgatgcc aagctattga aatgcacagc ttaggaatga
      361 agcttccaat ttccggtgag actccattgg aaaaagggaa ggaaagggca tggaaatggg
      421 tgggagcgac cctgaaggtg atctgggagg agttggagga ggcaaaacca tgatcacaac
      481 atattgtatg aaaaaaattc ttttcaatta aaagaaagaa agaaaagaag aacagtgatg
      541 cttcattatt tgtcatattt tataaacatt ccagactgtt atcaaaaatg agccctagga
      601 atctacttct ttcagtgagt aagcatttat gaaaaagata ttcataaaat cttaaactga
      661 ttcctggaca cgtattccat ggcagttgga aggtagccat atctttaaag atctatccat
      721 agttttaatt aacttaattt ttagtcaaat actaggcatt attcatgtgg caattttgat
      781 caatccataa aactccgtca aaagaagaaa tgggcaaatt caagagaccc aggaaggtgg
      841 tgctggtcct ggcgggacaa tactctggat gcaaagccgt catcctgaag atcattgatg
      901 atggcacctc cgaccgccct tacagccatg ccctggtggc tggaattgac cgctattccc
      961 gaaaagtggc atctgcaatg ggcaagaaga aaatcgccaa gcgatccaag atcaagtcct
     1021 ttgggaaaat ttataactac aacttcctca tgcccacaag ataccctatg gatatcccct
     1081 tgcacaaaac tgttgtcaac aaagatgtgt gtagagaccc agctttgaaa tatatggcca
     1141 ggcaggaggc cgaggtcaaa tctgaggaga gacatatagg atacggcagg gaagaacaaa
     1201 tgtttttttc cagaagcttc acttttaggt atatttttat ttccattatt aaaaataaa
//
