LOCUS       XM_006241213            2560 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to FLJ25323 protein
            (RGD1560034), transcript variant X8, mRNA.
ACCESSION   XM_006241213
VERSION     XM_006241213.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006241213.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006241213.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2560
                     /gene="RGD1560034"
                     /note="similar to FLJ25323 protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:679534"
                     /db_xref="RGD:1560034"
     CDS             1351..2415
                     /gene="RGD1560034"
                     /codon_start=1
                     /product="uncharacterized protein C12orf42 homolog isoform
                     X1"
                     /protein_id="XP_006241275.1"
                     /db_xref="GeneID:679534"
                     /db_xref="RGD:1560034"
                     /translation="MHKVAHVEDGRGLLNIRLLKNRMQKSFYYIPIVSSVTLWERGSP
                     QISPIPRCKTTALPCSRFLTHMKKFSSSNKTDKLHFLPFPGSIGTHSPKTGKRLLCVH
                     QYTIPKSPASTVSLDEEVGGEACPSLTPSSEMEEDDLFFTINEMQKPPRRLPKQTWIS
                     PFLETQAANKLLKRSQSVNTISLEAAGRHIPLENHPLGNSKGDSGPVMRPFTAIGLCR
                     NLSQNSSQPISCRTSETVQQKKVSASGSPTQTDSLAVCGSALGRGTVATTTRETTCKH
                     LYHAEWRPKAAISSLSPSPSPSRVVKEPLPLLVGSSTRLFSKKLMKACSSVAPRPHRD
                     FHRACSQTLSKPVVNTHTHC"
ORIGIN      
        1 ctctggtaag catcgagggg ctcagggagg agagggatcc tgcctgcttg acatgatgtt
       61 ggagtttgat gtctgtcgtt gaggcaaagc tctctttatt tgctattcgc tggcagaggc
      121 aactgagtga tatttttttt gtgtatgtgt aggaagctaa ggggcacctc tgagaggctg
      181 agggagtcct acccgtctct gccatgtgtc atcttgtatt caggtggaat aatcagactc
      241 aaacccatcg cttttctaag tgatgttcat ctgtggactt gaccgcatca ggactcaact
      301 aagaagctgc ttgttgtgac tagcgctctc tctctctctc tctctctctc tctctctctc
      361 tctctctctc tctctctggt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
      421 gtgtgtgtgt ggcatttcca gggaggatgg gctgaggaga ggagatatgc ctcccccgac
      481 cccgccatgt tgacacgatc ttccagcagc agcccaggtt taaagaattc cagtgaataa
      541 ttagtgctgt gcagccaaca ttccggaaac tccagactgg agggtctgcc tgccactgta
      601 gttggtgctg ttgcttctga caccagattt gaactgcctt ggccttcaat ctggactgag
      661 gatcagtgac gttttaagaa ccttcaagcc ctcggggcca cactgggact gctgaggcat
      721 ccagctttgt ggaatgaact ttcattggac tacatgagct ttatgggata agtcaactga
      781 ataaatctcc catatatatg taatagaata tatattatta tcaattatgt tcctctagag
      841 aacactgatt ctatatatat tgaaagtatt gtgcacctca aagagaactc ttgcttctca
      901 gaattctcct ttatgagtca caattaaaag tagttttggc taagcagaat ttttttttat
      961 cctttgagga ggtttgcata tcttctcaca tgtacctatt ttatcaaggc cacagagatt
     1021 ttgatagctc acctttatct tgcatattaa ggatacttta gtaggtcatg ttctgggggg
     1081 caatcactga aaatgacatc accgggaccg tcactggcta cccagtgaca gcaaactaag
     1141 gaaagttaat caaaggttaa tctgattctc gagttgcatt taaagattag aggatagaaa
     1201 ttggacttgc tgatagactt tagttggatt ttagtttgag aagctgagca aggtggataa
     1261 caaacttcct ggcaaggaac agaaactctg ttaggaaaga aaatgaagaa aacgcaagag
     1321 aaaatttgag gagattaaaa ccacaaatgg atgcataaag tggctcatgt ggaggacggg
     1381 agaggccttc tgaatattag actcttgaaa aacaggatgc agaagtcctt ttactatatt
     1441 cccattgtga gcagtgtgac cctgtgggaa agaggctcac ctcagataag ccccatccct
     1501 cgttgtaaaa ctacagcttt gccctgctcc agattcctta ctcacatgaa gaaattttcc
     1561 tcatcaaata aaacggataa attacatttt ctgccatttc caggatctat agggacccat
     1621 agtccaaaga caggtaaaag actactttgc gttcaccagt acacaatccc caagtctcct
     1681 gcgagcaccg tttctttaga cgaagaagtt ggtggagaag cctgtccttc cctgacaccg
     1741 tccagtgaaa tggaggaaga cgatcttttc tttactatta atgaaatgca gaagccacct
     1801 agacgactgc ccaagcagac ctggatcagc ccatttctgg aaacgcaagc tgccaataaa
     1861 ctgcttaaaa gatcacagtc ggtgaatacc atttctctgg aagctgcagg tagacatata
     1921 ccacttgaga accatccctt gggcaactcc aagggagatt ctggtcctgt gatgagacct
     1981 ttcaccgcca ttggcctctg cagaaatctc agtcagaact cctctcagcc gatcagctgt
     2041 aggacttccg aaactgtgca gcagaaaaaa gtgtcagcct caggatcccc aactcaaaca
     2101 gattctctag ctgtgtgtgg aagtgcatta ggaagaggca cggttgccac cacaacacgg
     2161 gagacaacct gcaagcatct ttatcacgcc gaatggaggc caaaggcagc tatctcttcc
     2221 ctttcccctt ccccttcccc ttcccgtgta gtcaaagagc ccctgcctct gctcgtgggc
     2281 tcctctactc gtttattttc caagaagtta atgaaggctt gctcctcagt ggccccgcgc
     2341 ccacaccggg atttccatag ggcttgttca cagactcttt cgaagccggt ggtgaatact
     2401 cacacacact gctgagaagg aattgttctg cgagctctgc ccatcttcca atcaatgcct
     2461 gcccagaaca acagaaaggg cctcagatgt attggtttcc acagaaccat tgttaggctt
     2521 tgtgaagcat ttctgaacct aataaataac gtcaaaagtc
//
