LOCUS       XM_039106076             627 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Ac2-210 (RGD1560017), mRNA.
ACCESSION   XM_039106076
VERSION     XM_039106076.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..627
                     /gene="RGD1560017"
                     /note="similar to Ac2-210; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 38 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:362181"
                     /db_xref="RGD:1560017"
     CDS             30..584
                     /gene="RGD1560017"
                     /codon_start=1
                     /product="60S ribosomal protein L17-like"
                     /protein_id="XP_038962004.1"
                     /db_xref="GeneID:362181"
                     /db_xref="RGD:1560017"
                     /translation="MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIRGMHIRKA
                     TKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNA
                     ELKGLDLDSLVIEHIQVNTAPKMRRRTYRAHGRINPYMSSPCHIEMILPEKEQIVPKP
                     EGEAAQKKKISQKKLKKQKLMARE"
ORIGIN      
        1 ctgtacgcgg ccagaggtga cctgtgaaga tggttcgcta ctcccttgac ccagaaaacc
       61 ccacaaaatc atgcaaatca agaggctcaa accttcgggt tcactttaag aacacccggg
      121 aaactgccca ggccatcagg ggtatgcata tccgcaaagc caccaagtat ctgaaggatg
      181 tcactttaaa gaagcagtgt gtgccattcc ggcggtataa tggtggagtc ggtaggtgcg
      241 cccaggccaa acagtggggt tggacacagg gacggtggcc aaaaaagagt gctgaatttt
      301 tgctgcacat gcttaaaaat gcagagagta atgctgaact taagggttta gacttagatt
      361 ctctagtcat tgaacacatc caggtgaaca cggcacctaa gatgcgcaga cgaacctaca
      421 gagctcacgg ccggattaac ccatacatga gctccccctg ccacatcgag atgatcctcc
      481 ctgagaagga acagattgtt ccaaagccag aaggggaggc tgcacagaag aaaaagatat
      541 cccagaagaa actgaagaaa caaaaactca tggcacggga ataaattcag cataaataaa
      601 tgcggataaa gtaaaaaaaa aaaaaaa
//
