LOCUS       XM_574311               1036 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to glycoprotein, synaptic 2
            (RGD1560015), mRNA.
ACCESSION   XM_574311
VERSION     XM_574311.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_574311.9.
            
            On Jan 21, 2021 this sequence version replaced XM_574311.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1036
                     /gene="RGD1560015"
                     /note="similar to glycoprotein, synaptic 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 10 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:499018"
                     /db_xref="RGD:1560015"
     CDS             16..933
                     /gene="RGD1560015"
                     /codon_start=1
                     /product="very-long-chain enoyl-CoA reductase-like"
                     /protein_id="XP_574311.1"
                     /db_xref="GeneID:499018"
                     /db_xref="RGD:1560015"
                     /translation="MKHYEVDAKTREKLCFLDKVEPQATISEIKTLFTKTLPQWYPAR
                     QSLRLDPKGKSLKDEDVLQKLPVGTTATLYFRDLGAQISWVTVFLTEYAGPLFIYLLF
                     YFRVPFIYGRKYDFTSSQHMVVHLACMCHSFHYIKRLLETLFVHRVSHGTMPLRNIFK
                     NCTYYWGFAAWMAYYINHPLYTPPTYGVQQVKLALAIFVICQLENFSIHMALRDLRPA
                     GSKIRKIPYPTKNPFTWLFLLVSCPNYTYEVGSWIGFAIMTQCVPVALFSLVGFTQMT
                     IWAKGKHRSYLKEFRDYPPLRMPIIPFLL"
ORIGIN      
        1 tcctgtggaa gaaccatgaa gcactacgag gtggatgcaa agacgaggga gaagctgtgc
       61 ttcctggaca aggtagagcc tcaggccacc atttctgaaa tcaagaccct tttcaccaag
      121 acactcccgc agtggtatcc tgcccgccag tccctccgcc tggaccccaa ggggaagtcc
      181 ctgaaagatg aagatgtgtt gcagaagctt cctgtgggca ccacagccac gctctacttc
      241 cgggacctcg gggcccagat cagctgggtg acggtcttcc tgacggagta tgctgggccc
      301 cttttcatct acctgctctt ctacttccgg gtgcccttca tttatggccg caaatatgac
      361 tttacatcca gtcagcatat ggtggtgcac ctcgcctgca tgtgccactc cttccactac
      421 atcaagcgcc tgctggagac tctctttgtg caccgagtct ctcacggaac catgcccctg
      481 cgaaacatct tcaaaaactg cacctactac tggggctttg ctgcgtggat ggcttattac
      541 atcaaccacc ctctctacac accccctacc tatggagttc agcaggttaa gctggcactg
      601 gccatttttg tgatctgtca gcttgagaac ttctctatcc acatggctct ccgggatctt
      661 cggccagcgg ggtcgaaaat caggaagatc ccatacccca ccaagaaccc cttcacctgg
      721 ctgtttctgt tagtgtcctg tcccaattac acttacgagg tcggctcctg gattggcttt
      781 gccatcatga cacagtgtgt cccagtggcc ctcttctccc tggtgggctt cacccagatg
      841 actatctggg ccaagggcaa gcatcgcagc tacctgaagg agttccgtga ctacccaccc
      901 ctgcgcatgc ccataatccc cttcctgctc tgagcagctc ctcccgagct cagcccagta
      961 atgccctcca cctactaccc ctgtcctgat gtggctggcc aaggctctcc agcagcaaca
     1021 ataaaacctg cttacc
//
