LOCUS       XM_039088951             524 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein L27a
            (RGD1559972), mRNA.
ACCESSION   XM_039088951
VERSION     XM_039088951.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039088951.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..524
                     /gene="RGD1559972"
                     /note="similar to ribosomal protein L27a; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 13 long SRA reads, 16 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:363817"
                     /db_xref="RGD:1559972"
     CDS             30..509
                     /gene="RGD1559972"
                     /codon_start=1
                     /product="60S ribosomal protein L27a-like"
                     /protein_id="XP_038944879.1"
                     /db_xref="GeneID:363817"
                     /db_xref="RGD:1559972"
                     /translation="MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRIN
                     FDKYHPGYFVKVGMRQCHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGVAPIID
                     VVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACSGGLKPLQRLIKCKH"
ORIGIN      
        1 ggcttgcctc tttcttttct gtcaccgcca tgccatccag actgaggaag acccggaaac
       61 tccggggcca cgtgagccac ggccacggtc gcatcggtaa gcaccgcaag cacccaggag
      121 gccgcgggaa tgctggaggc ctgcatcacc acaggatcaa ctttgacaaa tatcatccag
      181 gttacttcgt taaagttggc atgaggcagt gccacttgaa gaggaaccag agcttctgcc
      241 caactgtcaa cctggataaa ttatggacgt tggtcagcga gcagacacgg gtcaatgcag
      301 caaaaaacaa gactggagtt gctcccatca ttgacgttgt tcgatcaggc tactacaaag
      361 ttctggggaa ggggaagctc cctaagcaac ctgtcatcgt gaaggccaag ttcttcagca
      421 gaagagctga agagaagata aagggtgtgg gaggtgcctg ttctggtggc ttaaagccac
      481 ttcagaggtt aattaaatgc aaacattaaa aaaaaaaaaa aaaa
//
