LOCUS       XM_008773314            1289 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to melanoma antigen 2
            (RGD1559970), mRNA.
ACCESSION   XM_008773314
VERSION     XM_008773314.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008773314.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008773314.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1289
                     /gene="RGD1559970"
                     /note="similar to melanoma antigen 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:503444"
                     /db_xref="RGD:1559970"
     CDS             157..1185
                     /gene="RGD1559970"
                     /codon_start=1
                     /product="melanoma-associated antigen B5"
                     /protein_id="XP_008771536.2"
                     /db_xref="GeneID:503444"
                     /db_xref="RGD:1559970"
                     /translation="MLRSQKSKPHAQEKHLQNQGEAQACRDDQATAGETPKAARESSA
                     TSQSQPKAKSSSTPKASQKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDL
                     IARRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEV
                     REVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKI
                     LKKKQIYPGKKHRIFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETS
                     KMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPT
                     ASTTPVDT"
ORIGIN      
        1 ctctctccaa ggtcctttcg ttttccttgg agacaactgt tacttccctt gtcacagttt
       61 gaggaccgga ccaggaggtg ctgaggagag ctttctgagg cctgtgactc aacaaaacta
      121 ggaaacaagg tgtttgcatc accaacatca gtgatcatgc ttcgaagtca gaagagcaag
      181 ccccatgctc aggagaaaca cctccagaac caaggtgagg ctcaggcttg tcgagatgat
      241 caggcaacag caggagaaac accaaaggca gcaagagagt cttctgccac ctcccagagc
      301 cagcctaagg ctaagtcttc cagcactccc aaggcaagtc agaaagcaaa accatctgcc
      361 aaacttattc tgagtagctc ttcctcagaa tcagatgaaa gttcccatga ggaaagtgag
      421 ccaagtgtac aaaaggatcg cccttttctg caccaagatc tgatcgcaag gagggtggca
      481 atactgttac agtacctgct ccacaactac aatttgaagc agctcactac caaggaagaa
      541 atgctgaagg ttatcaccaa gaagtatgaa aaagactttc ctgagatcct caggaaagcc
      601 tctgagaagc tggaagatgc ctttgcagtg gaagtgaggg aagtcagctc cagtcaaccc
      661 tcatacgacc tcatcagcaa gctgaagctc cccaacaatg ggaggatccg tgctggtaaa
      721 ggcttaccca agaccggttt cctgatgagt atcctgggta tcatcttcat tcaaggcaac
      781 agcgccagtg aagaagacat ttggaaaatc ctgaagaaga agcaaatcta tccagggaag
      841 aagcaccgca tctttggtga gccccggaag ctcatgaccc agtatttggt gaagctgaag
      901 tacctggagt accggcaggt ggcccacagt gatcctccac gctatgagtt cctgtggggt
      961 ccccaagccc atgctgaaac aagcaagatg aaggtcctgg aatatttggc caagatcaac
     1021 aaaacaacac ctcatgccat ctcagccctt taccaagagg ctttgaaaga tgagaaagag
     1081 cgagcagaag tcagagatga agataatact gataccactg accaatctac tgaaggttcc
     1141 ccagaaaaat caccaacagc ttctaccacc cctgttgaca cttgaacttt tcctgtcatc
     1201 aagagatttt cttgaaaata taatcttaag agttagtagg tcagtacacc gggaatatca
     1261 ggggattgtc aacatggtta agactagtt
//
