LOCUS       XM_039084762             619 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S17
            (RGD1559955), mRNA.
ACCESSION   XM_039084762
VERSION     XM_039084762.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084762.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..619
                     /gene="RGD1559955"
                     /note="similar to 40S ribosomal protein S17; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 3 long SRA reads, 20 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:367324"
                     /db_xref="RGD:1559955"
     CDS             189..596
                     /gene="RGD1559955"
                     /codon_start=1
                     /product="40S ribosomal protein S17-like"
                     /protein_id="XP_038940690.1"
                     /db_xref="GeneID:367324"
                     /db_xref="RGD:1559955"
                     /translation="MSRVRTKTVRKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSK
                     NLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDT
                     KEMLTLLDFGRLSHLQVTQPTVGMNFETPLGAV"
ORIGIN      
        1 tcgacagaat gctattttat ttaaatgatc tgtaaattgg aaagtagatc tatgaagtca
       61 gagtggaatg aattacagga gattggagag ttcaacctta agaacaattc ctgggaggcc
      121 aattcttact ctgcgtagag tccactttaa gaagcaatct cttgcctctt ttaccgagag
      181 ccatcaacat gagccgcgtt cgcaccaaga ccgtgaggaa ggcggcccgg gtcatcatcg
      241 agaagtacta cacgcgcctg ggtaatgact tccacaccaa caagcgcgtg tgcgaggaga
      301 tcgccatcat ccccagcaaa aaccttcgga acaagatagc cggctatgtc acgcatctga
      361 tgaagcggat tcagagaggt cctgtgagag gcatctccat caagttgcag gaagaagaga
      421 gggagaggag agataattat gttcctgagg tttcagccct agatcaggag atcattgagg
      481 tagatcctga caccaaggaa atgctgacgc ttctggactt tggccgtctc tcccacctcc
      541 aggtcactca gcctacggtt gggatgaatt tcgaaacacc acttggagct gtttaatccg
      601 ttatgccata ttttcaata
//
