LOCUS       XM_039091408            1443 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to spermine synthase
            (RGD1559938), mRNA.
ACCESSION   XM_039091408
VERSION     XM_039091408.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039091408.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1443
                     /gene="RGD1559938"
                     /note="similar to spermine synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:498273"
                     /db_xref="RGD:1559938"
     CDS             218..1216
                     /gene="RGD1559938"
                     /codon_start=1
                     /product="spermine synthase-like"
                     /protein_id="XP_038947336.1"
                     /db_xref="GeneID:498273"
                     /db_xref="RGD:1559938"
                     /translation="MAESVHTWQDHGYLATYTNKNGSFANLRIYPHGLVLLDLQSYDS
                     DVQGKQETDCLLNKIEEKMKELSQDSTGRVKRLPPIVRGGAIDRYWPTADGRLAEYDI
                     DEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESDLAYTRAIMGNGKEDYTGKDV
                     LILGGSDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRRTCGDVLDNLKGDCYQVL
                     IEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDG
                     KYFTQGNCVDLTEALSLYEEQLRRLYCPVEFSKEIVCVPSYLELWVFYTVWKKAKP"
ORIGIN      
        1 aggggtaaaa acgtgtgtga gggcactccc cgccggcccg cagcctgaca cgccgcgcgg
       61 tccctcagtc tccctcgatc gcctccccag gcatggcaca gggcctcgcc acactatggc
      121 agcagcaagg cacagcacgc tcgacttcac gctcggcgcc aaagctgatg gtgaggccat
      181 tctgaaaggc cttcagtcca tcttttagga gcaggggatg gcagagtcgg tgcacacctg
      241 gcaggaccat gggtatttag caacctacac gaacaagaat ggcagctttg ccaatttgag
      301 aatttatcca catggattgg tgttgctgga ccttcagagt tacgacagtg atgtgcaagg
      361 caaacaagaa actgactgcc ttttgaataa aatagaagaa aaaatgaaag aattgagtca
      421 agacagtact ggccgggtga agcgattacc acccatagtt cgaggagggg ccattgacag
      481 atactggcct actgctgacg ggcgcctggc tgagtatgac atagatgaag tggtgtatga
      541 cgaagactca ccttatcaga acattaaaat tcttcactca aagcagtttg ggaatattct
      601 catcctcagc ggggatgtta atttggcaga gagtgacttg gcatatacca gggccatcat
      661 gggcaatggt aaagaagact acactggcaa agatgtactg attctgggag gcagcgatgg
      721 aggcatatta tgtgaaattg tcaaactgaa accaaagatg gtcactatgg tagagattga
      781 ccagatggta attgatggat gtaagaaata catgcgcaga acatgtggag atgtcttaga
      841 caatcttaaa ggagattgct atcaggttct tatagaagac tgtatcccag tactgaagag
      901 gtacgccaaa gaagggagag agtttgatta tgtgattaat gatttgacag ctgtccctat
      961 ctctacatct ccagaagaag attccacatg ggagtttctc agactgattc ttgacctgtc
     1021 aatgaaggtt ctgaaacagg atggaaaata tttcacacag gggaactgtg tcgacttgac
     1081 tgaagccctg tcgctctatg aagaacagct gaggcgcctg tattgtcctg tggaattctc
     1141 aaaagagatt gtctgtgtcc cttcatactt ggaattgtgg gtattttaca ctgtttggaa
     1201 gaaagctaag ccttaaagat gagagtcccc tgaatgatgt gttctgcaag ccaccttcct
     1261 gacctccata tgccgtatat gccatcacat gagtcaggca actgttcatg aattccttca
     1321 agtggttttc tttttaatta ttatttttaa tttaaaaaag ccaatgggaa aaatgtatat
     1381 tttgatgagt tagggtgtta atttttgaaa gtcagccgga ggacaattag ccctgcaaag
     1441 act
//
