LOCUS       XM_039113032             645 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Macrophage migration
            inhibitory factor (MIF) (Delayed early response protein 6)
            (RGD1559921), mRNA.
ACCESSION   XM_039113032
VERSION     XM_039113032.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039113032.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..645
                     /gene="RGD1559921"
                     /note="similar to Macrophage migration inhibitory factor
                     (MIF) (Delayed early response protein 6); Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins, and 64% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:366675"
                     /db_xref="RGD:1559921"
     CDS             1..417
                     /gene="RGD1559921"
                     /codon_start=1
                     /product="macrophage migration inhibitory factor-like"
                     /protein_id="XP_038968960.1"
                     /db_xref="GeneID:366675"
                     /db_xref="RGD:1559921"
                     /translation="MEMRSLAWLTPRFAPSSSPCSQSLRHHAMFIRNTNVLHASEPEE
                     FHSELTQQLAQGTGKPARFIAVHVVPDQLTTFSDMNDPCTLCSLHSISKIGGTQNRNY
                     SKLLCGLLSDRLHISLDPVYINMNAANLGWNSSTLA"
ORIGIN      
        1 atggaaatga ggtccctggc ttggctcaca ccacgctttg caccgtcctc cagtccttgc
       61 tcgcagtctc tccgccacca tgccatgttc atcaggaaca ccaatgttct ccacgcctct
      121 gagccagagg agtttcactc tgagctcacc cagcagctgg cacagggcac tggcaagccg
      181 gcacggttca tcgcagtgca cgtggtccca gaccagctca cgacttttag cgacatgaac
      241 gacccctgca ccctctgcag cctgcacagc atcagtaaga ttggtggcac ccagaaccgc
      301 aactacagca aactgctatg cggcctactg tcagatcgcc tgcatatcag tctggacccg
      361 gtctacatca acatgaatgc agccaacctg ggctggaaca gttccaccct cgcttgagtc
      421 cgggcctcac ttaactgcac cgctgttctt caagccttgc tgcatgcaga gttctgtgtt
      481 tacccaccct aacgatgccc accttccggt agggaaaaat aaatggttta atagtcactt
      541 ccaggggctg gggatttagc tcagtggcag agcgcttacc taggaagcgc aaggccctgg
      601 gttcggtccc cagctccgaa aaaaagaacc aaaaaaaaaa aaaaa
//
