LOCUS       NM_001402001            3299 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus similar to Zinc finger and SCAN domain containing
            protein 2 (Zinc finger protein 29) (RGD1559747), mRNA.
ACCESSION   NM_001402001
VERSION     NM_001402001.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3299)
  AUTHORS   Bonaldo,M.F., Lennon,G. and Soares,M.B.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.2042295.1,
                                           SRR26360176.1465319.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-157               JAXUCZ010000004.1  78910777-78910933
            158-1030            JAXUCZ010000004.1  78912147-78913019
            1031-1174           JAXUCZ010000004.1  78913157-78913300
            1175-3299           JAXUCZ010000004.1  78914592-78916716
FEATURES             Location/Qualifiers
     source          1..3299
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..3299
                     /gene="RGD1559747"
                     /note="similar to Zinc finger and SCAN domain containing
                     protein 2 (Zinc finger protein 29)"
                     /db_xref="GeneID:312310"
                     /db_xref="RGD:1559747"
     exon            1..157
                     /gene="RGD1559747"
                     /inference="alignment:Splign:2.1.0"
     exon            158..1030
                     /gene="RGD1559747"
                     /inference="alignment:Splign:2.1.0"
     CDS             186..797
                     /gene="RGD1559747"
                     /codon_start=1
                     /product="zinc finger protein LOC728743 homolog"
                     /protein_id="NP_001388930.1"
                     /db_xref="GeneID:312310"
                     /db_xref="RGD:1559747"
                     /translation="MTELVSSRGGSPIGDREEGLGDDQGLVIHHPAEEQSHRCPLCGQ
                     TFSQQPSLVRHQKAHVGAGRAAAFVCPECGKAFSVKHNLEVHQRTHTGERPFPCPDCG
                     RCFSLKQNLLTHQRIHSGEKPHQCAQCGRCFREPRFLLNHQRTHARMPTPHPRRPGVF
                     GERRPYFCPRCGKSFAREGSLKTHQRSHGHGPESQAAHLSSVL"
     exon            1031..1174
                     /gene="RGD1559747"
                     /inference="alignment:Splign:2.1.0"
     exon            1175..3299
                     /gene="RGD1559747"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tagtagggaa agtgggaagg ttgcccaatg acaggaccag gctcagattg gctaaggaga
       61 ctttgatggg tctgtctttg caaatgccag cacagatgtt tggggaggga ttatgggtgg
      121 agactcagag caatggattc taatcccttt ctccaagggg ctggtgattg catccggaag
      181 tgcccatgac agagctggtg tcctccaggg gagggtcccc tataggggac agggaggagg
      241 gtctgggaga cgatcaaggc ctggttatcc accacccagc ggaggaacag tcccaccgct
      301 gcccactgtg cgggcagacc ttctcccagc agcctagcct ggtgcggcac cagaaagcgc
      361 acgtgggggc tggccgggca gccgccttcg tgtgtcccga gtgcggcaag gccttcagcg
      421 tcaaacacaa cctggaagtg caccagcgca cacacaccgg cgagcggccc ttcccctgcc
      481 ccgactgcgg ccgctgcttc agcctcaagc agaacctgct cacgcaccag cgcattcaca
      541 gcggcgagaa gccgcaccag tgcgcgcagt gcggtcgctg cttccgcgag ccgcgcttcc
      601 tgctcaacca ccagcgtacc cacgcgcgca tgcccacacc gcacccacgc cgtcccggtg
      661 tcttcgggga gcggcgaccc tacttctgcc ctcgctgcgg caagagcttc gcgcgtgagg
      721 gctcgctcaa gacccaccag cgcagccatg gccacgggcc tgagagtcaa gcggcccatt
      781 tgagcagtgt gctatgatct gtgggagacc taccaccacc agctgcctcc aatccagaag
      841 ccgcatccaa gggtgctgag ttgcagtccc ctgtctggat gggctcctgg gaggagggtg
      901 gggccatctt agggtgttga taggcctccg ggccacagcc cccttttctt tctgaccctg
      961 gaccccttag ctggctgcat gtacctttgg gcacctgcat tagtttgcct cctgcggctg
     1021 cctagagcag cgtgtcagac ttgaaagcga cttgaagagg gacatttgtc acagttccca
     1081 ggcccaacct tggtccccaa agcctcagcc tcctgcaccc actgtctggt ggccttgaga
     1141 agccatttca cttcttgtct cagtttgctt atctatacga aacggacagg attttgtggc
     1201 ccaggacctg cagggtgcat ctaggcatgg aaactaaaat ggagtctcaa aagtcctggg
     1261 ttcctggtgt gaggacatgt ctcttcagaa gacctacctc tggaggtgcc ctgtgttgag
     1321 tagatgaatt agcagctgat tccatgcctt ggtgggaaaa ctccccaaat ctgacttgag
     1381 tcacaactgg gcaagcctcg tttgagtttc tgattctaga cctcaactca ggtgttgggg
     1441 cagagacagc acctgtgtgg agaggcggtt tctctctccc agcctggccc agcacatagt
     1501 ggaagggcgg ggcaaggagt gactgtgcta ttgcagcaag ttgatgtcgg actgggctca
     1561 agcggcaaaa tttccctcaa gatgtgaaca gcacctgagg gcttccgtgc ccgttctgag
     1621 ccagaaaggg tagcagttca ggggcttgat gaaggctaat gaaggctgtg gaccttctcc
     1681 tagaactcat ggagcattca cagtgccaag cagtttcagg agcccctgga ctccagccta
     1741 aagacttcag ccctggggat tccatctccc atccttccct tactccacac aagtgttgct
     1801 ctcctcttgg gaataaagaa ttctgaggct gagccccttg tagtccattc agcctcttct
     1861 ctgcaatctg acagtacaca cactggattt ctggagccag gcttccctcc tcagacactg
     1921 cccaagacca gctccccggc ttggttcttt cccccattct gtgtctgaca ggctgtagga
     1981 ttttacaatg gagccttctg cttggctttg gctctgactg ccttgtggag tctcaaggga
     2041 aggctggtct gctgaagggt cagtaaatca tttccctgtg tctattccac agagaaggaa
     2101 tcatgcttcc actagccata tgcaaccaat ccggcctcct tgctgggcag gcatgcagct
     2161 ccaggcacac atcaccgggg aaggtgagat tagaggggca ccatggtgcc cgtgggtcta
     2221 agcagtggga gaagccagtg gaggggttgt gtgtgtttcc taagtaagca gggatacaac
     2281 caggaggtga gggtcttggg tcactgctgg tcaaggactc gtatccacat atatgagcag
     2341 gtcagttgag ggcccacaac tgtctccctt ccttcctaga atgagccatt cattaggaaa
     2401 gggggagggg ctttcttttc tactgggact tggtagaaac ccctggattc ctgacttggg
     2461 gtcttactgc ctgtattccc cattcagttt gggttccagg tttttacaga acccctatgc
     2521 cttattctgg ggtcactgag taatcagaga ttggagaaag gggaggcgct acccatacca
     2581 tgggaacttc cacacacctc tttcccttgg ctaacttagg ggagctctca ccgtgccccc
     2641 cagctaactg cccagcttgt ctcttccccg ctgtaactgt gccatgccct cccctatact
     2701 gctctgaaat gttcttcccc agcccccaaa ccctcttatt caccagggca gagcctccca
     2761 gtgcacccag ccaatgcccc tccttaacag tcctcatgtt aacacacggt gtctccctga
     2821 gtattatgtg ctgtttagtc ttgtgcttgt tccttctgtg tttgtgtatg tatacgtgct
     2881 atgtgtgcac atgcgcatct tgagtcccca actagactgt gagctccctg agggcagggg
     2941 ctgtcatttc ttcttcaacc tctattgggt ctagcccagg cctgggctcc caactctcag
     3001 gaagacactt gtcaactgga tgatgaagca catgctggag gtcgtctgag gtggagggtc
     3061 gtgtacaagg gggagcgtgc acatgggtta gccagaggtg tagggtgttg gactgtgggc
     3121 tgactccttg gatcaataat agatgctcga ggcctcaggt ccttgtagta gaagcaggag
     3181 ggacaccctc ccctacacga catacctaga ccatggccac gcaggagtgc acatgaatgg
     3241 atgtccaggt tggatattcc tgttgtagga ggtgactcaa ataaacgttc tccacaaca
//
