LOCUS       XM_039113178             577 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to H+ ATP synthase
            (RGD1559629), mRNA.
ACCESSION   XM_039113178
VERSION     XM_039113178.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039113178.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..577
                     /gene="RGD1559629"
                     /note="similar to H+ ATP synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:366614"
                     /db_xref="RGD:1559629"
     CDS             108..506
                     /gene="RGD1559629"
                     /codon_start=1
                     /product="ATP synthase F(0) complex subunit C1,
                     mitochondrial-like"
                     /protein_id="XP_038969106.1"
                     /db_xref="GeneID:366614"
                     /db_xref="RGD:1559629"
                     /translation="MQTKALLISPVTIRSCTRGLIRPVSASLLSRPEAPSKTSFCSSL
                     HLQVARQEFQTSFISDTAAKFIDAGAATVGVAGSGAAIGTVFGNLIIGYARNLSLKQQ
                     LSSYPILGFALSEVMRLFCLMVTFLILFTM"
ORIGIN      
        1 cgacaggcaa gcttaggcaa tgaaggaaac cattgaaaac aaaaagctgt tgaaatctat
       61 ttgaggctgg gtacttagac caagggctaa agctgcaaga ttgaaatatg cagaccaagg
      121 cactgctcat ttctccagtt acgatccgct cctgtaccag gggtctaatc agacctgtgt
      181 ctgcctccct cttgagtaga ccagaggccc catctaagac gtctttctgc agcagcctac
      241 atctccaggt ggccagacaa gaatttcaga ccagttttat cagcgacaca gcagccaagt
      301 ttattgatgc aggggctgcc acagttggtg tggctggatc aggggctgcc attggcacag
      361 tgtttggtaa cttgattatt ggctatgcca ggaacctgtc tctcaagcag cagctctcct
      421 cctatcccat tctgggtttt gccctatctg aggtcatgag acttttctgt ctgatggtca
      481 ccttcctcat cctcttcacc atgtgaggct ccctggggtc acccaactgt tcctgaagct
      541 ttgactccat gccagtccag gtgctggagt gtgctgg
//
