LOCUS       NM_001168285             741 bp    mRNA    linear   ROD 26-SEP-2024
DEFINITION  Rattus norvegicus immunoglobulin superfamily, member 7 like 1
            (Igsf7l1), mRNA.
ACCESSION   NM_001168285 XM_213514
VERSION     NM_001168285.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 741)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from GU138867.1.
            
            On Dec 1, 2009 this sequence version replaced XM_213514.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: GU138867.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760384, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="W"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..741
                     /gene="Igsf7l1"
                     /gene_synonym="RGD1559482"
                     /note="immunoglobulin superfamily, member 7 like 1"
                     /db_xref="GeneID:498022"
                     /db_xref="RGD:1559482"
     exon            1..112
                     /gene="Igsf7l1"
                     /gene_synonym="RGD1559482"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..687
                     /gene="Igsf7l1"
                     /gene_synonym="RGD1559482"
                     /note="immune activating receptor CD300d1"
                     /codon_start=1
                     /product="immunoglobulin superfamily, member 7 like 1
                     precursor"
                     /protein_id="NP_001161757.1"
                     /db_xref="GeneID:498022"
                     /db_xref="RGD:1559482"
                     /translation="MIPRGIGLWLPSALLLSRVPGCFPLRGPSSVTGTVGESLSVTCQ
                     YEERFKMNKKYWCRGSHVLLCKDIVKTGGSEEARNGRVSVRDDPDNLTFTVTLESLIL
                     EDAGTYMCGVDIPFTNHPLGIDEFFKVELSVVPGSSLWSSTTVPETIRSSLVHTQPSV
                     TTEDTIPAPSARPRSLLGSLYLCILVFLELPLFLCMLCAVLWVNRPQRCSG"
     exon            113..457
                     /gene="Igsf7l1"
                     /gene_synonym="RGD1559482"
                     /inference="alignment:Splign:2.1.0"
     exon            458..572
                     /gene="Igsf7l1"
                     /gene_synonym="RGD1559482"
                     /inference="alignment:Splign:2.1.0"
     exon            573..741
                     /gene="Igsf7l1"
                     /gene_synonym="RGD1559482"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttgtccctc taggctctgg catgggtgca ggtgacaaat gagctgaaga aatgatcccc
       61 agaggaatag gattgtggct gccttcagct ctgctcctct ctcgggtccc aggctgtttc
      121 cctctgcgtg gccccagcag tgtgacaggc actgtggggg agtccctgag cgtgacttgt
      181 cagtatgagg agagattcaa gatgaataag aaatactggt gcagagggtc acatgttcta
      241 ctttgcaaag atattgtcaa gaccggaggc tcagaagaag ctagaaatgg ccgagtgtcc
      301 gtcagggatg atccagacaa cctgaccttc acagtgacct tggagagcct catcctggag
      361 gatgcaggca cctacatgtg tggggtggat ataccattta ctaatcaccc cttggggatt
      421 gatgagttct tcaaggttga attgtctgtg gtcccaggtt caagcctttg gagcagtaca
      481 acagtcccag agaccatcag atcctcactg gttcatactc agcccagtgt gaccacagaa
      541 gacacaattc ctgctcctag tgcacggcct cggtcccttc tgggcagcct ctacctctgc
      601 atcctggtgt ttctggagtt gcccctgttc ctgtgcatgc tctgtgccgt cctgtgggtg
      661 aacaggcctc agaggtgcag tgggtgacat agcattgggc cctgtcatga gtaccagtga
      721 agtctgttga tatggaggcc c
//
