LOCUS       NM_001139506            2198 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 17 open reading frame
            75 (C10h17orf75), mRNA.
ACCESSION   NM_001139506 XM_221232
VERSION     NM_001139506.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Navarro Negredo,P., Edgar,J.R., Manna,P.T., Antrobus,R. and
            Robinson,M.S.
  TITLE     The WDR11 complex facilitates the tethering of AP-1-derived
            vesicles
  JOURNAL   Nat Commun 9 (1), 596 (2018)
   PUBMED   29426865
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jun 22, 2017 this sequence version replaced NM_001139506.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-187               JAXUCZ010000010.1  65871525-65871711   c
            188-268             JAXUCZ010000010.1  65870154-65870234   c
            269-394             JAXUCZ010000010.1  65868786-65868911   c
            395-538             JAXUCZ010000010.1  65867229-65867372   c
            539-596             JAXUCZ010000010.1  65866805-65866862   c
            597-716             JAXUCZ010000010.1  65864428-65864547   c
            717-781             JAXUCZ010000010.1  65862719-65862783   c
            782-918             JAXUCZ010000010.1  65862433-65862569   c
            919-1022            JAXUCZ010000010.1  65860359-65860462   c
            1023-2198           JAXUCZ010000010.1  65858774-65859949   c
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..2198
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /note="similar to human chromosome 17 open reading frame
                     75"
                     /db_xref="GeneID:303764"
                     /db_xref="RGD:1310429"
     exon            1..187
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     CDS             48..1229
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /codon_start=1
                     /product="protein Njmu-R1"
                     /protein_id="NP_001132978.1"
                     /db_xref="GeneID:303764"
                     /db_xref="RGD:1310429"
                     /translation="MLPSLQESLDGDEKELESSEEGGSAEERRLEPPPSSHYCLYSFR
                     GSRLTQNRGDSDDGRSCGTNAETPSGDDFSLSLVDSNLPSEVEPELRSFIAKRLSKGA
                     FFEGLGNVASVELRIPGYRVGCYYCLFQQEKLLPEIAAVESEHNPSEYVVCFLGGSEK
                     GLELFRLELDKYIQGLKSNMNCEERSLGSDLKSYLNSWYEDVLCPIQRVVLLFQEKLT
                     FLLHAALSYTPVEFKESDEKTKRDINRFLSVASLQGLIHEGTMTSLCMAMTEEQHKSV
                     IIDCSGPQPQFHNAGSNRFCEDWMQAFLHSAEGGNPFLFRQVLENFKLKAIQDTNNLK
                     RFIRQAEMNHYALFKCYLFLKNCGSGDILLKIVKVEHEEMPEAKSVVAVLEEFMREAL
                     V"
     exon            188..268
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     exon            269..394
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     exon            395..538
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     exon            539..596
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     exon            597..716
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     exon            717..781
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     exon            782..918
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     exon            919..1022
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
     exon            1023..2198
                     /gene="C10h17orf75"
                     /gene_synonym="RGD1310429"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggggaacgg tttgacagga acacagggcc gcgaggaggc tgcagcgatg ctcccgtctt
       61 tgcaggaatc gctggatggg gatgaaaagg agctggagag cagcgaagag ggtggctccg
      121 cggaagagcg gagactcgag ccgccgccca gcagccacta ctgcctgtac agcttccgcg
      181 gaagcagatt gacacagaac cgaggggata gtgatgatgg acgttcatgt ggcacaaatg
      241 cagaaactcc ctctggtgat gatttcagcc tgtcattggt ggattccaat ctaccatctg
      301 aagtggagcc ggagcttcgc agcttcatcg ctaagcgtct ctccaaggga gcgttctttg
      361 aagggctggg taatgttgca tctgtagagc tgagaattcc aggttaccga gttggttgtt
      421 attactgcct tttccaacag gaaaaactgc ttcctgaaat agcagcagtg gaatctgaac
      481 ataacccttc tgaatacgtg gtctgcttct taggaggctc tgagaaagga ctggagcttt
      541 tcaggcttga gttggacaag tatattcaag ggctgaagag taacatgaac tgtgaggaaa
      601 ggagcctggg gagtgatctg aagtcctatc tgaacagctg gtatgaggat gtgctgtgtc
      661 cgatccaaag ggtggttctt ctctttcagg agaaactgac ctttctgcta catgctgctc
      721 tgagttacac tcctgttgaa tttaaagaat cagatgaaaa aacaaagaga gacattaaca
      781 ggtttctgag tgtcgccagt ctccaaggac ttattcatga aggcaccatg acctctttgt
      841 gcatggccat gacagaggaa cagcataagt ctgtgatcat cgactgtagt ggcccccagc
      901 ctcagtttca caatgcagga agcaaccgtt tctgtgagga ctggatgcaa gctttcttac
      961 acagtgctga gggcggcaac ccttttcttt tcagacaagt cctggaaaac tttaaactga
     1021 aggctataca agacacaaac aatttgaaga gatttatccg gcaggcagag atgaatcatt
     1081 acgctttgtt taaatgttac ctgttcctta agaactgtgg cagtggcgat atccttttga
     1141 agattgttaa agtagaacat gaagaaatgc ccgaggccaa aagtgtggtg gcggtccttg
     1201 aagaattcat gagagaagca cttgtctgac attctggtcc cgagttgagg atctgtttca
     1261 tggagtatca tattgagggg catgtgaggg actgtagtta ccattgttta tagattgcgc
     1321 tgctcctaag gtgactggaa acacccgctt cttccttttg tgcttttttg tttaacttac
     1381 ttaaacacaa caatcagagg gatgtcttca ccaggttcta ggcagatgtc atgtgttaca
     1441 actggagttt tactgccttg ctagtctctt aaatcctaag catcaaacac gggtcgcctg
     1501 aaaagctctg gagatgatat ttggctactt gggaaagctc gctgtagtgt ttagcaggac
     1561 ttcctcttcc aaaagaaaca cagtatgtct ttctcagtac tttgtagaag tgtttgaagc
     1621 ataggatcct agcgaggtgt gctgctgcct gtaatcccag ctaatcagga ggttgggcag
     1681 gaggttctga ggttccaggc cagcctgagc tccaaagtga gtttatatcc agcctggact
     1741 acatggtatc atcatcatcc catcatagac aacctgttca atctgtgagt gcctgatgta
     1801 tatcgatggt tgcatgaagg atgaaaccag ctttttaggc aaatatacaa ataatgagtg
     1861 tataagaatt taaaaatgag ttttacatat agaagtttgt aggctgccga gatggcttag
     1921 aaggtaaaga aacctgccac caagtctgac gacctatgtt caatccccag tattcacatg
     1981 gtaggagaga atcagtttta caaattccct ctgacccata catacctgca tacacaatag
     2041 ataaatctat taagaaatgg tgggctggag aggcagctca gcagttaaga gcattgttgc
     2101 tctcagagga gccaacacct gcttggtggc tcacaaccat ctgtaacttc aatttcaagg
     2161 gatttgacac cctgttctga cctcctcagg atcaggca
//
