LOCUS       NM_001134579            1457 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 4 open reading frame
            17 (C2h4orf17), mRNA.
ACCESSION   NM_001134579 XM_001078280 XM_006233387 XM_342349
VERSION     NM_001134579.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On or before Aug 6, 2021 this sequence version replaced
            XM_006233387.3, NM_001134579.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.2878630.1,
                                           SRR26360176.1113116.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-232               JAXUCZ010000002.1  229395428-229395659 c
            233-322             JAXUCZ010000002.1  229389457-229389546 c
            323-526             JAXUCZ010000002.1  229383931-229384134 c
            527-591             JAXUCZ010000002.1  229380698-229380762 c
            592-735             JAXUCZ010000002.1  229373788-229373931 c
            736-817             JAXUCZ010000002.1  229372638-229372719 c
            818-1019            JAXUCZ010000002.1  229371474-229371675 c
            1020-1063           JAXUCZ010000002.1  229369567-229369610 c
            1064-1457           JAXUCZ010000002.1  229367215-229367608 c
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q43-q44"
     gene            1..1457
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /note="similar to human chromosome 4 open reading frame
                     17"
                     /db_xref="GeneID:362047"
                     /db_xref="RGD:1309170"
     exon            1..232
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
     exon            233..322
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
     CDS             250..1254
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /codon_start=1
                     /product="uncharacterized protein C4orf17 homolog"
                     /protein_id="NP_001128051.2"
                     /db_xref="GeneID:362047"
                     /db_xref="RGD:1309170"
                     /translation="MTERNKGCFIVRHTPHPRRVCHIQGLNNVPICTVKDDLPIRMLC
                     CPRQLSPSQKNETTLAKVSNPPRSASPESLSIRGVSPAKNKVPERPHSEPFRKINHNF
                     RTSRDNPLVNKKDEYKPKKPLVASRMCSGAASPSSDVMNTRINRNENTVCIPNYLDQE
                     IKILLKLCDILHTDSLTEVLDWLLQASNKEKEWLSALIHSELSEINLLTRHRVNTPEP
                     AAESRKSPTSVTPTTKLLQNSHAKLKALHESREEHQPLRMTSQGSEGNKMASKGAETP
                     LFIRRNKKLPVTEYFNNPKSPFKPNTQESRSARPMSVRSVQGYSPQRALYPLTHGREK
                     "
     exon            323..526
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
     exon            527..591
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
     exon            592..735
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
     exon            736..817
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
     exon            818..1019
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
     exon            1020..1063
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
     exon            1064..1457
                     /gene="C2h4orf17"
                     /gene_synonym="RGD1309170"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accagggagg caggcgcctg ggctctttgg agtgagagtg ggaagaactg gagggacacc
       61 actttgctct tttggaggcg tcagacagtc ggctgtttca ccggtaaaat ctccttaagt
      121 cctgagattt aaggaagtaa aaactcagcc gagacccagt atgaggctgg aaggacatca
      181 gcagacccga gttcctatcg gttgatttat ctgctttaaa aactgttctc agagtccaaa
      241 accagaaaca tgacggagag aaacaaaggc tgctttatcg tcaggcacac acctcatccc
      301 agaagagttt gccacatcca aggtttgaac aacgtcccca tctgcactgt gaaggatgac
      361 ttgcccatca gaatgctgtg ctgccctcgc cagttaagtc cttcacagaa gaatgagaca
      421 acactagcaa aagtcagtaa cccacccaga agcgcatccc cagagagcct gagtatccga
      481 ggagtgtcac cagccaaaaa caaagtgccc gaaaggcctc actctgagcc atttagaaaa
      541 atcaatcata acttcagaac ttccagagac aatcccttgg tgaataagaa ggatgaatat
      601 aaacctaaaa agccactagt agcctcaagg atgtgctctg gggctgcctc cccgtcctca
      661 gatgtgatga acaccagaat caacaggaat gaaaacactg tgtgcatacc taactacctg
      721 gatcaggaga taaagatcct gttgaagctc tgtgacattt tacatactga ttctctgaca
      781 gaggttctgg actggctgct tcaagcaagt aacaaagaaa aggagtggtt atcagctctg
      841 attcattctg aactatctga gataaaccta ttgactcgcc acagagtgaa caccccagag
      901 ccagctgcag agtccaggaa gtcacccacc tctgtaacac ccacaaccaa actgctgcaa
      961 aactcacatg ccaagctgaa agcgctgcat gaatctagag aagagcatca gcctctcaga
     1021 atgacaagtc aaggatccga aggaaacaag atggcatcaa aaggagctga gaccccactg
     1081 tttataagaa gaaataagaa attgcctgtt acagaatatt tcaacaatcc aaagtctcct
     1141 ttcaagccca acactcagga gagcagatca gcaagaccaa tgtcagtaag gagtgtgcaa
     1201 ggctacagcc ctcagagagc actctatccc ttaacacatg gaagggagaa gtgaacacta
     1261 ggtggtcctt tcacaaaagt ggacttcaca ctgacagaac atcaacgtag tttaaaaatg
     1321 accaaacagt cctctatctg gtggcacatg taagtctcaa aaacacttac atataatgct
     1381 agaaataaat attaatgaag actatttcta tttgtagttg taatatttgt agaataaata
     1441 cacttattta aatgtca
//
