LOCUS       NM_001014130            1838 bp    mRNA    linear   ROD 29-APR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            105 (C13h1orf105), transcript variant 1, mRNA.
ACCESSION   NM_001014130 XM_341140
VERSION     NM_001014130.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083573.1.
            
            On Apr 20, 2005 this sequence version replaced XM_341140.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083573.1, CK595374.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q22"
     gene            1..1838
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /note="similar to human chromosome 1 open reading frame
                     105"
                     /db_xref="GeneID:360864"
                     /db_xref="RGD:1309106"
     exon            1..141
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..720
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /note="isoform 1 is encoded by transcript variant 1;
                     uncharacterized protein C1orf105 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C1orf105 homolog isoform
                     1"
                     /protein_id="NP_001014152.1"
                     /db_xref="GeneID:360864"
                     /db_xref="RGD:1309106"
                     /translation="MEKRELKTFVPKFDKIPWLSEASVVNKPLILSIPRRYRSSIVLT
                     SYKKDMYLPHLLEDSDFISKARKNEHENLLPRNKQLCSTCRGYQEMKTLQPKIFKIPD
                     HREPSPQNSVNHGEVSLHSQEQQLHACNDIPTESIRYRLPILGPRTAVFHRLLSDAYK
                     TPQDTQYCAFPKKKGMSKTVKQITTPHAALYPCRSYSAI"
     exon            142..227
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /inference="alignment:Splign:2.1.0"
     exon            228..312
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /inference="alignment:Splign:2.1.0"
     exon            313..396
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /inference="alignment:Splign:2.1.0"
     exon            397..464
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /inference="alignment:Splign:2.1.0"
     exon            465..523
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /inference="alignment:Splign:2.1.0"
     exon            524..665
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /inference="alignment:Splign:2.1.0"
     exon            666..1712
                     /gene="C13h1orf105"
                     /gene_synonym="RGD1309106"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggctctccc acctgcttcg gtgtctaacc aagaggtacc gctgcagtct cctcttgaca
       61 gcacagagag gtgtctgtgc tctccagttc cttgctcaaa aagccgagaa cgcctgagag
      121 atggagaaga gagagctaaa gacttttgtt ccaaaatttg acaagattcc ttggcttagt
      181 gaggccagcg tggtaaacaa gccgttaata ctcagcatcc ctagaaggta ccgctcctcc
      241 attgttctga cttcatacaa gaaggatatg tatttgccac acttgcttga agattcagac
      301 ttcatatcga aggctagaaa gaacgagcat gaaaacctgt tacccagaaa caagcagctg
      361 tgctccacat gtcgaggata tcaagaaatg aaaacgttac agccaaaaat tttcaaaata
      421 cctgaccatc gggaaccatc cccccagaat tctgtgaatc acggcgaggt gagccttcat
      481 tcgcaagagc agcagttaca tgcctgcaat gatattccaa cagagagcat tcgctacagg
      541 ctgcccattt taggccccag gactgctgtt ttccacaggc tgctgtcaga tgcctacaaa
      601 actcctcagg atactcaata ctgtgccttt cccaaaaaga aaggaatgag caagacagtg
      661 aaacagataa caacacctca tgctgcactg tatccctgca ggagctactc ggctatttga
      721 gatatatttc aaataaaggc aagtccatcc ctaggcttaa taactatcat aaaaccacaa
      781 actaagatcc ataaatttgg gagtttgaag gcagacttgg ttatgtattg tgattctgcc
      841 ttctaaggag ttatcatttc atttagagaa atataaatgt gcatgctcct atcacacaca
      901 cacacacaca cacacacaca cacacacaca cacacacaca cagtgcatgg aacatgagtt
      961 acaaaaagga gcacccagcc atttcagcaa taacatcctc catatcacca gtcgccctgc
     1021 tgtctgacgg gaacaaagaa gcaattattg aacctctcca gcaaggccaa tgggagagaa
     1081 atagctatgt gttatcgctt gttctttgtg aagtctttgg cgagacattt tgtcacctgg
     1141 tcagcaaagt gcagaaaagc caggtgaagc atggatggat atcagttatt tcagaagttt
     1201 actgggttca tcagctagta agagccatcc agtggggatt ccaagctgtg aaaaaggcta
     1261 gaaactttat tccctcgatt tgagaaaaag tgcataaaga gtacaaaatg tgtaaaatca
     1321 agaaaaggat cgtggtaaca ctggttagct cttaaaagtc aagcagagtg gctggagggc
     1381 agaaaatggc agagaggttt ttgcaaactc caccctgact ttcctttcgg gttgtgaact
     1441 acttcagtgt ttcactgact caaaaacaga acagggtgaa acaaaagacc tctttgaaag
     1501 tgccaagaag ctaatgtagc tttgacactg gaaacctgat aaaccatctg caaaattgtc
     1561 ctgaagacac tcccacagac ggacataaac cttgagttct atcaagttca agcaagtgtc
     1621 cggtccaaag aatacatttt atctctggcc ttcaggaagt tttgccattg aaaggcaagt
     1681 tctggcaccc aacaataaac ggttcatgct aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
