LOCUS       NM_001105959            1720 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            21 (C13h1orf21), mRNA.
ACCESSION   NM_001105959 XM_001070787 XM_213896
VERSION     NM_001105959.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473958.2.
            
            [WARNING] On Oct 17, 2024 this sequence was replaced by
            NM_001105959.2.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_213896.3, XM_001070787.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q21"
     gene            1..1720
                     /gene="C13h1orf21"
                     /gene_synonym="RGD1309104"
                     /note="similar to human chromosome 1 open reading frame
                     21"
                     /db_xref="GeneID:289084"
                     /db_xref="RGD:1309104"
     exon            1..58
                     /gene="C13h1orf21"
                     /gene_synonym="RGD1309104"
                     /inference="alignment:Splign:2.1.0"
     exon            59..280
                     /gene="C13h1orf21"
                     /gene_synonym="RGD1309104"
                     /inference="alignment:Splign:2.1.0"
     CDS             187..552
                     /gene="C13h1orf21"
                     /gene_synonym="RGD1309104"
                     /codon_start=1
                     /product="uncharacterized protein C1orf21 homolog"
                     /protein_id="NP_001099429.1"
                     /db_xref="GeneID:289084"
                     /db_xref="RGD:1309104"
                     /translation="MGCASAKHVATVQNEEEAQKGKSYQNGDVFGDEYRIKPVEEVKY
                     MKNGAEEEQKIAARNQENLEKSASSNTRLKTNKEIPGFVHQPRANMHISESQQEFFRM
                     LDEKIEKGRDYCSEEEDIT"
     exon            281..375
                     /gene="C13h1orf21"
                     /gene_synonym="RGD1309104"
                     /inference="alignment:Splign:2.1.0"
     exon            376..452
                     /gene="C13h1orf21"
                     /gene_synonym="RGD1309104"
                     /inference="alignment:Splign:2.1.0"
     exon            453..513
                     /gene="C13h1orf21"
                     /gene_synonym="RGD1309104"
                     /inference="alignment:Splign:2.1.0"
     exon            514..1720
                     /gene="C13h1orf21"
                     /gene_synonym="RGD1309104"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctaagagca ttgaaaccaa ctggccatgg actgcagcct ctgagaccaa gacccaaagt
       61 gcacaccctg ttgccagcac caccacaagg tggatttcct ctgtgcttga agagagagaa
      121 aacaatgtcc ccgcgcctgt agagatgatt tgcagttcag cccagctgaa gctgactgaa
      181 tgagctatgg gctgtgcctc tgccaagcat gttgctactg ttcaaaacga ggaggaagca
      241 cagaaaggga agagctacca gaacggggat gtgtttggcg atgagtatag gatcaaaccc
      301 gtggaagagg tcaaatacat gaaaaacggg gcagaagagg agcagaaaat agcagccagg
      361 aaccaagaaa acctggaaaa aagtgccagc tcgaacacaa ggcttaaaac taataaagaa
      421 atccctggat tcgtccatca acccagagca aacatgcaca tctctgaaag ccaacaagaa
      481 ttcttcagaa tgctggatga aaaaattgaa aagggtcggg attactgttc tgaagaagag
      541 gacatcacat agcatcaatt ctcccagtca gaccaggaac tactactgtg taaataggtt
      601 acaccccagt tgaaaccttt gcaaaggtcg gttctcttca ctgaacagca ctatagcaaa
      661 cgaagactgt tccataccct atgccccatt aaattacagt gtttcttaat gaacctgcaa
      721 aggaatattg ctaaacacaa acacacacac acacacacac acacacacac acacacacac
      781 acacacacac acagagagaa aaagaaaaaa acaaaaaaca aaactgttct ggaactttct
      841 ttgttgctgc tagttaaaac ttgttacaac ttttcacttc tctcgtgtcc aagtatgcag
      901 caaaattctg cagttcacct taaagatcct gttggtttca cgatgctctc tagcctgatt
      961 tctctacggt ggggtagagg tgaactctga tacagacgtc agttctagcc tggttctgct
     1021 ttgatgtcaa gcatccctcc cctcttttct ccttctccgt ctctttcgag tggtctagag
     1081 atggcctgag ccttgcttct cactggtaat gtggggctat ggacactgga tggtgaccat
     1141 ggtgagccta gtttctctgc tcaaaagcag aagagccaca attgttgtga cctgactccc
     1201 ggaagtgaca aaggaacgtg cgagcgaggg agcagtaggt cgttccactg actaggactc
     1261 ttagtgcagg actaagcgtg tagctttggc ttttgctcag acgcaagtgg aggtgtgagc
     1321 acgtgaccac aatcattttc aacccctcct tcctcgcctt ttttttttct aagaaaataa
     1381 acattttgct gtttttatgt atccttgtct tctcccattc atccagttca gtattttaag
     1441 atgaccctag gtgtggaagc taagtcctcc tttcacagtg acactgatga ttggcctaga
     1501 tggctcccca cccttctggt gacatcgacc atggtttgga agggctgtga gtggtcagag
     1561 gagatgagga caacccggtg actccttagg agggctggaa accaccgtta accttccact
     1621 ttgttagcta ttaaaacgcc acgctgtttt ctaatcccca attcggtatg ttacttgagc
     1681 tttgctcatt cgtttacgtc tccagctctg gtggtgtggg
//
