LOCUS       XM_039100243            2094 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to DNA segment, Chr 19,
            Brigham & Womens Genetics 1357 expressed (RGD1308750), mRNA.
ACCESSION   XM_039100243
VERSION     XM_039100243.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100243.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2094
                     /gene="RGD1308750"
                     /note="similar to DNA segment, Chr 19, Brigham & Womens
                     Genetics 1357 expressed; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 3 long SRA reads, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:294066"
                     /db_xref="RGD:1308750"
     CDS             25..1968
                     /gene="RGD1308750"
                     /codon_start=1
                     /product="pumilio homolog 3-like"
                     /protein_id="XP_038956171.1"
                     /db_xref="GeneID:294066"
                     /db_xref="RGD:1308750"
                     /translation="MEVKGKKKITGKSPQTSQGKNKFHKNSESSSAKAFPRKAAKEGG
                     PKVTSKNFEKGATKPGKKGVKQFKNKPQGGKGPKDKFQKANKFNKKRKFQPDGKSDES
                     AAKKPKWDDFKKKKKELKQNRQLSDKTNYDVVVRAKHIWESLRRKDCDKEKRVKLMSD
                     LQKLIQGKIKTIAFAHDSTRVIQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIV
                     KKFLMYGSKPQIAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYG
                     NTFQLYKSADHPTLEKVLEVQPGKLELILDEMKQILTPMAQKEAVIKHSLVHKVFLDF
                     FTYAPPKLRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEK
                     IANGQYSHLVLLAAFDCIDDTKLVKQIIISEVISSLPSIVNDKYGRKVLLYLLSPRNS
                     AHLVPEIIQLLQKGDGNAHSKKDTAIRRRELLESISPALLSYLQGHTREVVLDKSVCV
                     LVSDILGSATGDAQPAMDAIAGLAAEELYPGGKDGELHIAEHPAGHLVLKWLIEQDKK
                     IKENGKEGCFAKTLVECFGVKNLKSWASINRGAIVLSSLLQSCDQDVVNKVKAGLKTL
                     IPTLEKTKSTSKGIQTLLEKLTA"
ORIGIN      
        1 cccccacgtg tgcgaagtgc tgtgatggaa gtcaaaggga agaaaaaaat tacaggaaag
       61 agtccacaga catcacaagg aaagaataaa tttcataaaa acagtgagtc tagttctgca
      121 aaggcattcc caaggaaagc tgctaaggaa ggcgggccta aagtcacatc taagaacttt
      181 gagaaaggtg ccacaaaacc tggcaagaag ggtgtgaagc agttcaagaa caagccacaa
      241 gggggcaaag gaccgaagga caaattccag aaggcaaata aattcaacaa gaagcggaaa
      301 ttccagccag atgggaaaag tgatgaatca gcagccaaga aacccaagtg ggatgacttc
      361 aaaaagaaga agaaagagct gaagcagaac agacagctca gtgataagac caattacgac
      421 gtcgtggttc gagcaaagca catttgggag agcttgagaa gaaaagactg tgacaaagaa
      481 aaaagggtga agctcatgag tgatttgcag aagctgattc aaggaaaaat taaaactatt
      541 gcctttgcgc atgactcaac tcgagtgatc cagtgcctca ttcagtatgg gagcgaggag
      601 cagaggaagt gggctttcga agaattgcaa ggtgacttgg ttgaattaag taaagccaaa
      661 tattccagga atatcgttaa gaaatttctc atgtatggaa gtaaaccaca gattgcggag
      721 ataatcagaa gttttaaagg tcatgtgagg aagatgctgc ggcattcaga ggcatcggcc
      781 attgtggagt atgcgtacaa cgacaaagcc attttggaac agaggaacat gctgacagag
      841 gagctctatg ggaacacatt tcagctttac aagtcagcag atcacccaac gctggaaaag
      901 gtgctagagg tgcagccagg gaagctagaa cttatcctgg atgagatgaa gcagattctg
      961 actcccatgg cccaaaagga agctgtgatt aagcactcac tggttcataa agtattcttg
     1021 gactttttta cctatgcacc cccaaaactt cgatcagaac taattgaagc catccgggaa
     1081 gcagtggtgt acctggccca cacacacgat ggcgccagag tggccatgca ttgcttgtgg
     1141 catggtacac ccaaggacag gaaagtgatt gtgaaaacaa tgaagacgta tgtggagaag
     1201 attgctaatg gccagtactc tcacctggtt ctcctggcag cgttcgattg tattgatgat
     1261 accaagcttg tgaagcagat aatcatatca gaagtcatca gctccttgcc cagcatcgtt
     1321 aatgacaaat atggaaggaa agtcctgctg tacctgctga gcccccgaaa ctccgcccac
     1381 ttggtgccag agatcatcca gctgctgcag aagggcgacg gcaatgcaca cagtaagaag
     1441 gacactgcaa tccgccggcg tgagctcttg gagtccatct ctccagcttt gctaagctac
     1501 ctgcaaggac acactcgaga ggtggtgctg gacaagtctg tatgtgtgct ggtgtctgac
     1561 atcctgggat ctgctactgg ggacgctcag cctgctatgg atgccatcgc cggtttggca
     1621 gcagaggaac tgtatcctgg gggcaaggac ggagagctcc acattgctga gcatcctgca
     1681 ggacatctgg tcctcaaatg gttaatagag caagataaaa agataaaaga aaatggaaaa
     1741 gaaggttgtt ttgcaaaaac ccttgtagag tgctttggtg tgaagaacct caagtcctgg
     1801 gccagcatca accgaggagc catcgttctt tccagccttc ttcagagttg tgaccaggac
     1861 gttgtaaaca aagtcaaagc tggactgaaa accctgattc ctaccttgga aaaaaccaaa
     1921 agcaccagca aaggcatcca gactctgctt gagaagttga ctgcataggc gtgccagatg
     1981 agcaagctgg aacccacttc ccgaggggaa gggtggaatc tgtcacactc atacctggat
     2041 gccctatgca tgtacttgtt aaaggaccta tttatatata aaattgtaaa agag
//
